BLASTX nr result

ID: Bupleurum21_contig00035694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035694
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...   106   2e-31
emb|CAN67856.1| hypothetical protein VITISV_041256 [Vitis vinifera]   106   2e-31
ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative ...    97   8e-29
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-27
ref|XP_003545229.1| PREDICTED: anaphase-promoting complex subuni...    91   2e-25

>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score =  106 bits (264), Expect(2) = 2e-31
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166
           LATDDDA P+ICFLLQEQKKLLSVRLQ+V++NNEI+FDIK DMSWSIPA++AVP+ VTRP
Sbjct: 313 LATDDDAAPLICFLLQEQKKLLSVRLQSVEINNEIVFDIKPDMSWSIPAVAAVPVIVTRP 372



 Score = 54.3 bits (129), Expect(2) = 2e-31
 Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = -3

Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGT-YEFSHNLKPLDAAS 3
           P  DI+ LAS NTL LYSGKQCLCR++LP SLG     SH L   + AS
Sbjct: 380 PFADILVLASENTLLLYSGKQCLCRYLLPCSLGNRLVSSHTLDSSEPAS 428


>emb|CAN67856.1| hypothetical protein VITISV_041256 [Vitis vinifera]
          Length = 510

 Score =  106 bits (264), Expect(2) = 2e-31
 Identities = 49/60 (81%), Positives = 57/60 (95%)
 Frame = -2

Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166
           LATDDDA P+ICFLLQEQKKLLSVRLQ+V++NNEI+FDIK DMSWSIPA++AVP+ VTRP
Sbjct: 232 LATDDDAAPLICFLLQEQKKLLSVRLQSVEINNEIVFDIKPDMSWSIPAVAAVPVIVTRP 291



 Score = 54.3 bits (129), Expect(2) = 2e-31
 Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = -3

Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGT-YEFSHNLKPLDAAS 3
           P  DI+ LAS NTL LYSGKQCLCR++LP SLG     SH L   + AS
Sbjct: 299 PFADILVLASENTLLLYSGKQCLCRYLLPCSLGNRLVSSHTLDSSEPAS 347


>ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative [Ricinus communis]
           gi|223532263|gb|EEF34066.1| meiotic checkpoint regulator
           cut4, putative [Ricinus communis]
          Length = 1703

 Score = 96.7 bits (239), Expect(2) = 8e-29
 Identities = 43/60 (71%), Positives = 53/60 (88%)
 Frame = -2

Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166
           LATDDDA P++CFLLQEQKKLLSVRLQ++ +NNEI+FD+K DMSWSI A +A P+ +TRP
Sbjct: 313 LATDDDAAPVLCFLLQEQKKLLSVRLQSLAINNEIIFDVKPDMSWSISATAAAPVIITRP 372



 Score = 55.5 bits (132), Expect(2) = 8e-29
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -3

Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGTYEFSHNLKPLDAA 6
           P+ DIV LA  NTL LYSGKQCLC++ +P SLG    SH+LK L  A
Sbjct: 380 PYSDIVVLAPENTLLLYSGKQCLCKYFMPSSLGK---SHDLKILGLA 423


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
           predicted protein [Populus trichocarpa]
          Length = 1929

 Score = 97.1 bits (240), Expect(2) = 5e-27
 Identities = 42/60 (70%), Positives = 55/60 (91%)
 Frame = -2

Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166
           LATDDDA P+ICFLLQEQKKLLSV+LQ++++NNEI+FDIK D+SWS+ A++A P++VT P
Sbjct: 312 LATDDDAAPVICFLLQEQKKLLSVKLQSLEINNEIIFDIKPDVSWSVAAVAAAPVSVTHP 371



 Score = 48.9 bits (115), Expect(2) = 5e-27
 Identities = 24/48 (50%), Positives = 31/48 (64%)
 Frame = -3

Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGTYEFSHNLKPLDAAS 3
           P+ DIV LA  N+L L SGKQ LC+++LP   G    SHNL+  + AS
Sbjct: 379 PYTDIVVLAPDNSLLLISGKQLLCKYLLPSFFGKGHLSHNLEFSETAS 426


>ref|XP_003545229.1| PREDICTED: anaphase-promoting complex subunit 1-like [Glycine max]
          Length = 1694

 Score = 91.3 bits (225), Expect(2) = 2e-25
 Identities = 40/60 (66%), Positives = 51/60 (85%)
 Frame = -2

Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166
           +ATDDD  P++CF  QEQ+KLLSV LQ V++NNEI+FD+K DMSW+I AI+A P+TVTRP
Sbjct: 298 MATDDDTAPVVCFFHQEQRKLLSVSLQIVEINNEIVFDVKPDMSWNISAIAASPVTVTRP 357



 Score = 49.7 bits (117), Expect(2) = 2e-25
 Identities = 21/42 (50%), Positives = 29/42 (69%)
 Frame = -3

Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGTYEFSHNLK 21
           P+ DI+ LA  N L LYSGKQCLC+++LP  L   +  H+L+
Sbjct: 365 PYSDIMVLAPENVLLLYSGKQCLCKYVLPSCLNKDKILHDLE 406


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