BLASTX nr result
ID: Bupleurum21_contig00035694
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00035694 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni... 106 2e-31 emb|CAN67856.1| hypothetical protein VITISV_041256 [Vitis vinifera] 106 2e-31 ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative ... 97 8e-29 ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2... 97 5e-27 ref|XP_003545229.1| PREDICTED: anaphase-promoting complex subuni... 91 2e-25 >ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis vinifera] Length = 1716 Score = 106 bits (264), Expect(2) = 2e-31 Identities = 49/60 (81%), Positives = 57/60 (95%) Frame = -2 Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166 LATDDDA P+ICFLLQEQKKLLSVRLQ+V++NNEI+FDIK DMSWSIPA++AVP+ VTRP Sbjct: 313 LATDDDAAPLICFLLQEQKKLLSVRLQSVEINNEIVFDIKPDMSWSIPAVAAVPVIVTRP 372 Score = 54.3 bits (129), Expect(2) = 2e-31 Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -3 Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGT-YEFSHNLKPLDAAS 3 P DI+ LAS NTL LYSGKQCLCR++LP SLG SH L + AS Sbjct: 380 PFADILVLASENTLLLYSGKQCLCRYLLPCSLGNRLVSSHTLDSSEPAS 428 >emb|CAN67856.1| hypothetical protein VITISV_041256 [Vitis vinifera] Length = 510 Score = 106 bits (264), Expect(2) = 2e-31 Identities = 49/60 (81%), Positives = 57/60 (95%) Frame = -2 Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166 LATDDDA P+ICFLLQEQKKLLSVRLQ+V++NNEI+FDIK DMSWSIPA++AVP+ VTRP Sbjct: 232 LATDDDAAPLICFLLQEQKKLLSVRLQSVEINNEIVFDIKPDMSWSIPAVAAVPVIVTRP 291 Score = 54.3 bits (129), Expect(2) = 2e-31 Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -3 Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGT-YEFSHNLKPLDAAS 3 P DI+ LAS NTL LYSGKQCLCR++LP SLG SH L + AS Sbjct: 299 PFADILVLASENTLLLYSGKQCLCRYLLPCSLGNRLVSSHTLDSSEPAS 347 >ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative [Ricinus communis] gi|223532263|gb|EEF34066.1| meiotic checkpoint regulator cut4, putative [Ricinus communis] Length = 1703 Score = 96.7 bits (239), Expect(2) = 8e-29 Identities = 43/60 (71%), Positives = 53/60 (88%) Frame = -2 Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166 LATDDDA P++CFLLQEQKKLLSVRLQ++ +NNEI+FD+K DMSWSI A +A P+ +TRP Sbjct: 313 LATDDDAAPVLCFLLQEQKKLLSVRLQSLAINNEIIFDVKPDMSWSISATAAAPVIITRP 372 Score = 55.5 bits (132), Expect(2) = 8e-29 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = -3 Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGTYEFSHNLKPLDAA 6 P+ DIV LA NTL LYSGKQCLC++ +P SLG SH+LK L A Sbjct: 380 PYSDIVVLAPENTLLLYSGKQCLCKYFMPSSLGK---SHDLKILGLA 423 >ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1| predicted protein [Populus trichocarpa] Length = 1929 Score = 97.1 bits (240), Expect(2) = 5e-27 Identities = 42/60 (70%), Positives = 55/60 (91%) Frame = -2 Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166 LATDDDA P+ICFLLQEQKKLLSV+LQ++++NNEI+FDIK D+SWS+ A++A P++VT P Sbjct: 312 LATDDDAAPVICFLLQEQKKLLSVKLQSLEINNEIIFDIKPDVSWSVAAVAAAPVSVTHP 371 Score = 48.9 bits (115), Expect(2) = 5e-27 Identities = 24/48 (50%), Positives = 31/48 (64%) Frame = -3 Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGTYEFSHNLKPLDAAS 3 P+ DIV LA N+L L SGKQ LC+++LP G SHNL+ + AS Sbjct: 379 PYTDIVVLAPDNSLLLISGKQLLCKYLLPSFFGKGHLSHNLEFSETAS 426 >ref|XP_003545229.1| PREDICTED: anaphase-promoting complex subunit 1-like [Glycine max] Length = 1694 Score = 91.3 bits (225), Expect(2) = 2e-25 Identities = 40/60 (66%), Positives = 51/60 (85%) Frame = -2 Query: 345 LATDDDAVPIICFLLQEQKKLLSVRLQTVDLNNEILFDIKADMSWSIPAISAVPITVTRP 166 +ATDDD P++CF QEQ+KLLSV LQ V++NNEI+FD+K DMSW+I AI+A P+TVTRP Sbjct: 298 MATDDDTAPVVCFFHQEQRKLLSVSLQIVEINNEIVFDVKPDMSWNISAIAASPVTVTRP 357 Score = 49.7 bits (117), Expect(2) = 2e-25 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = -3 Query: 146 PHQDIVSLASHNTLCLYSGKQCLCRFILPPSLGTYEFSHNLK 21 P+ DI+ LA N L LYSGKQCLC+++LP L + H+L+ Sbjct: 365 PYSDIMVLAPENVLLLYSGKQCLCKYVLPSCLNKDKILHDLE 406