BLASTX nr result

ID: Bupleurum21_contig00035690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035690
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like ...   134   8e-30
ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like,...   134   8e-30
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   129   2e-28
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   129   2e-28
ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...   126   2e-27

>ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like [Cucumis sativus]
          Length = 271

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/113 (59%), Positives = 93/113 (82%), Gaps = 6/113 (5%)
 Frame = -3

Query: 322 LTEKIATVFEEAKASNATHIRKLKDLSSIR--ASSPLNFFAAFSKTLTPLFSFQRRLASA 149
           L +KIA + +EA++SNATH RKLK+L ++R  + SPL+F  AFSKTLTPLF+F RR++S 
Sbjct: 22  LPQKIAKILDEARSSNATHNRKLKELCALRIKSKSPLDFLTAFSKTLTPLFNFHRRISSV 81

Query: 148 ERIVRFVSIFATARD----ADSDAFLEEFLRFLIVACGAANKTARFRACQMIS 2
           ER++RF+S+F+T+RD    + +D FLEEFL+FL+VA  AANK+ARFRACQ++S
Sbjct: 82  ERLIRFISLFSTSRDPNFASHADDFLEEFLKFLLVASCAANKSARFRACQIVS 134


>ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like, partial [Cucumis
           sativus]
          Length = 251

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/113 (59%), Positives = 93/113 (82%), Gaps = 6/113 (5%)
 Frame = -3

Query: 322 LTEKIATVFEEAKASNATHIRKLKDLSSIR--ASSPLNFFAAFSKTLTPLFSFQRRLASA 149
           L +KIA + +EA++SNATH RKLK+L ++R  + SPL+F  AFSKTLTPLF+F RR++S 
Sbjct: 22  LPQKIAKILDEARSSNATHNRKLKELCALRLKSKSPLDFLTAFSKTLTPLFNFHRRISSV 81

Query: 148 ERIVRFVSIFATARD----ADSDAFLEEFLRFLIVACGAANKTARFRACQMIS 2
           ER++RF+S+F+T+RD    + +D FLEEFL+FL+VA  AANK+ARFRACQ++S
Sbjct: 82  ERLIRFISLFSTSRDPNFASHADDFLEEFLKFLLVASCAANKSARFRACQIVS 134


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
           gi|297745068|emb|CBI38660.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  129 bits (324), Expect = 2e-28
 Identities = 72/108 (66%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
 Frame = -3

Query: 322 LTEKIATVFEEAKASNATHIRKLKDLSSIR-ASSPLNFFAAFSKTLTPLFSFQRRLASAE 146
           L +KIA V +E+ ASNA HIRKLKDLS++R ASS   FF+AFSKTL PLF+F RR +SAE
Sbjct: 11  LMQKIARVLDESGASNAAHIRKLKDLSTLRSASSSSLFFSAFSKTLIPLFAFPRRTSSAE 70

Query: 145 RIVRFVSIFATARDADSDAFLEEFLRFLIVACGAANKTARFRACQMIS 2
           R VRF++ FA+  D+ + AFLEEF RFL+ A  AANKTARFRACQMIS
Sbjct: 71  RTVRFIATFASKCDS-TTAFLEEFFRFLVNAATAANKTARFRACQMIS 117


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  129 bits (324), Expect = 2e-28
 Identities = 72/108 (66%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
 Frame = -3

Query: 322 LTEKIATVFEEAKASNATHIRKLKDLSSIR-ASSPLNFFAAFSKTLTPLFSFQRRLASAE 146
           L +KIA V +E+ ASNA HIRKLKDLS++R ASS   FF+AFSKTL PLF+F RR +SAE
Sbjct: 11  LMQKIARVLDESGASNAAHIRKLKDLSTLRXASSSSLFFSAFSKTLIPLFAFPRRTSSAE 70

Query: 145 RIVRFVSIFATARDADSDAFLEEFLRFLIVACGAANKTARFRACQMIS 2
           R VRF++ FA+  D+ + AFLEEF RFL+ A  AANKTARFRACQMIS
Sbjct: 71  RTVRFIATFASKCDS-TTAFLEEFFRFLVNAATAANKTARFRACQMIS 117


>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 3/111 (2%)
 Frame = -3

Query: 325 RLTEKIATVFEEAKASNATHIRKLKDLSSIRA--SSPLNFFAAFSKTLTPLFSFQRRLAS 152
           RL  KIA + +EA+ S ATH RKLK+LS +R+  SS  +FF+AFSKTLTPLF FQRRLAS
Sbjct: 11  RLMLKIAAILDEARTSYATHNRKLKELSLLRSKSSSHSHFFSAFSKTLTPLFDFQRRLAS 70

Query: 151 AERIVRFVSIFATARD-ADSDAFLEEFLRFLIVACGAANKTARFRACQMIS 2
           A+R+V FVS FA A   A SD FL+ FL+FL+ A  A+NKTARFRACQ++S
Sbjct: 71  ADRVVFFVSAFAVATTAAASDEFLDHFLKFLLAAATASNKTARFRACQIVS 121


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