BLASTX nr result

ID: Bupleurum21_contig00035689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035689
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15665.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera] gi|...   153   1e-35
ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002511190.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
ref|XP_003522434.1| PREDICTED: snurportin-1-like [Glycine max]        134   6e-30

>emb|CBI15665.3| unnamed protein product [Vitis vinifera]
          Length = 182

 Score =  153 bits (387), Expect = 1e-35
 Identities = 78/108 (72%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   DGKLTTSDDPPVVFGYLNKEFIEKSELSTGNLLRFAVSEGGLKFSDGKLEKADLQYLGKV 181
           DG LTTSDDPPVVFG L+ +FI+KS L +GNLLRFAVS+GGL F DGKLE+ADL YLGKV
Sbjct: 73  DGNLTTSDDPPVVFGSLDGDFIQKSGLCSGNLLRFAVSDGGLSFVDGKLERADLHYLGKV 132

Query: 182 NRARAFADTYSKILFQHMVRHSPLRIDHLFASISSS--YEEDIHDVEM 319
           NRARAFAD+YSK++FQH VRHSPL ID L ASI+S+   E++  DVEM
Sbjct: 133 NRARAFADSYSKVMFQHSVRHSPLSIDDLLASITSTNDQEKEACDVEM 180


>ref|XP_002283742.1| PREDICTED: snurportin-1 [Vitis vinifera]
           gi|297734416|emb|CBI15663.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  153 bits (387), Expect = 1e-35
 Identities = 78/108 (72%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   DGKLTTSDDPPVVFGYLNKEFIEKSELSTGNLLRFAVSEGGLKFSDGKLEKADLQYLGKV 181
           DG LTTSDDPPVVFG L+ +FI+KS L +GNLLRFAVS+GGL F DGKLE+ADL YLGKV
Sbjct: 310 DGNLTTSDDPPVVFGSLDGDFIQKSGLCSGNLLRFAVSDGGLSFVDGKLERADLHYLGKV 369

Query: 182 NRARAFADTYSKILFQHMVRHSPLRIDHLFASISSS--YEEDIHDVEM 319
           NRARAFAD+YSK++FQH VRHSPL ID L ASI+S+   E++  DVEM
Sbjct: 370 NRARAFADSYSKVMFQHSVRHSPLSIDDLLASITSTNDQEKEACDVEM 417


>ref|XP_002321701.1| predicted protein [Populus trichocarpa] gi|222868697|gb|EEF05828.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/108 (67%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   DGKLTTSDDPPVVFGYLNKEFIEKSELSTGNLLRFAVSEGGLKFSDGKLEKADLQYLGKV 181
           DGKL TSDDPPVVFG L+ +FI+KS L +GNLLRFA+S+GGL   DGKL KADL YL K 
Sbjct: 311 DGKLVTSDDPPVVFGCLDSDFIQKSGLCSGNLLRFAISDGGLSSVDGKLVKADLHYLEKP 370

Query: 182 NRARAFADTYSKILFQHMVRHSPLRIDHLFASISSSYEEDIH--DVEM 319
           NRARAFAD+YSKI+FQH VRH PL+ID L ASISS  ++     D+EM
Sbjct: 371 NRARAFADSYSKIMFQHTVRHCPLKIDDLLASISSPDDQQNRPCDIEM 418


>ref|XP_002511190.1| conserved hypothetical protein [Ricinus communis]
           gi|223550305|gb|EEF51792.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 415

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/108 (62%), Positives = 87/108 (80%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   DGKLTTSDDPPVVFGYLNKEFIEKSELSTGNLLRFAVSEGGLKFSDGKLEKADLQYLGKV 181
           DG L +SDDPPVVFG L+  F++K  L +GNL+RFA+++GGL+F+DGKLEKADL YLGK 
Sbjct: 306 DGSLISSDDPPVVFGCLDLGFVQKEVLHSGNLVRFAINDGGLRFADGKLEKADLHYLGKP 365

Query: 182 NRARAFADTYSKILFQHMVRHSPLRIDHLFASISSSYEEDIH--DVEM 319
           NRARA AD+YSK++FQH VRHSPL+ID L AS+ SS ++     D+EM
Sbjct: 366 NRARASADSYSKVVFQHTVRHSPLKIDDLLASVCSSDDQQNRPCDIEM 413


>ref|XP_003522434.1| PREDICTED: snurportin-1-like [Glycine max]
          Length = 404

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/108 (62%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
 Frame = +2

Query: 2   DGKLTTSDDPPVVFGYLNKEFIEKSELSTGNLLRFAVSEGGLKFSDGKLEKADLQYLGKV 181
           DGKLTTSDDPP+VFG L+  FI++S L +G LLRF++ EGGL   DGKL+KADL YLGK 
Sbjct: 295 DGKLTTSDDPPMVFGCLDGSFIQQSGLHSGCLLRFSIGEGGLVLMDGKLDKADLHYLGKA 354

Query: 182 NRARAFADTYSKILFQHMVRHSPLRIDHLFASISSSYEEDIH--DVEM 319
           NRARA AD++SK++FQH VRHSPLRID L  S+S   +++    D+EM
Sbjct: 355 NRARASADSFSKVMFQHSVRHSPLRIDGLLESVSLPVDQESKACDIEM 402


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