BLASTX nr result

ID: Bupleurum21_contig00035659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035659
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    89   3e-16
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    89   5e-16
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    88   6e-16
gb|ABA99231.1| hypothetical protein LOC_Os12g34030 [Oryza sativa...    86   2e-15

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/112 (39%), Positives = 65/112 (58%)
 Frame = -2

Query: 339 DAAIILGIPLSSSRMEDSWYWSHETSGIYSVKSAYRRLQFLKTGYYVDDNRGFWKKLWQL 160
           D  +I  IPL++  +EDSWYW  +  G Y VK+ YR LQ    G        FW K W+L
Sbjct: 379 DKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQ----GDLGRPETSFWNKFWKL 434

Query: 159 KIPPKVKDFIWRAVNHCLPTKMNLQGKHVPINTLCPFCDIYNEMTIHCLVSC 4
           KIP KV++ +W+  ++C+ T MNL+ ++V ++ LC +C+   E   H L  C
Sbjct: 435 KIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGC 486


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = -2

Query: 291  DSWYWSHETSGIYSVKSAYRRLQFLKTGYYVDDNRGFWKKLWQLKIPPKVKDFIWRAVNH 112
            DSW W HE++G YS +SAYR LQ +     +DD    +K LW+LKIP K   F WR +  
Sbjct: 2395 DSWTWKHESNGYYSSRSAYRLLQGISDVASMDD---IFKDLWKLKIPTKATIFAWRLIRD 2451

Query: 111  CLPTKMNLQGKHVPI-NTLCPFCDIYNEMTIHCLVSC 4
             LPTK NL+ + + I ++LCPFC I +E   H    C
Sbjct: 2452 RLPTKSNLRRRQIDISDSLCPFCSIKDETASHLFFEC 2488


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
 Frame = -2

Query: 339 DAAIILGIPLSSSRMEDSWYWSHETSGIYSVKSAYRRLQFLKTGYYVD----DNRGFWKK 172
           DA +IL IPL  S  ED   WS +  G Y+ +S Y  L+  +    +     D+   W +
Sbjct: 451 DADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQ 510

Query: 171 LWQLKIPPKVKDFIWRAVNHCLPTKMNLQGKHVPINTLCPFCDIYNEMTIHCLVSC 4
           LW++  PPK+ +F WRA  +CLPT+  L  +HV     CP C    E T+H LV C
Sbjct: 511 LWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVEC 566


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
 Frame = -2

Query: 339  DAAIILGIPLSSSRMEDSWYWSHETSGIYSVKSAYRRLQ-FLKTGYYVD---DNRGFWKK 172
            DA +IL IPL  S  ED   WS +  G Y+ +S Y  L+ F ++   V    D+   W +
Sbjct: 1181 DADLILYIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAALVASDVDSNFVWAQ 1240

Query: 171  LWQLKIPPKVKDFIWRAVNHCLPTKMNLQGKHVPINTLCPFCDIYNEMTIHCLVSC 4
            LW++  PPK+ +F WRA  +CLPT+  L  +HV     CP C    E T+H LV C
Sbjct: 1241 LWKVTTPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSEPETTLHALVEC 1296


>gb|ABA99231.1| hypothetical protein LOC_Os12g34030 [Oryza sativa Japonica Group]
          Length = 346

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
 Frame = -2

Query: 339 DAAIILGIPLSSSRMEDSWYWSHETSGIYSVKSAYRRL------QFLKTGYYVDDNRGFW 178
           DAA IL +P   +  +D W W+ + +GI++V+SAYR L          TG    D    W
Sbjct: 68  DAAAILNMPRPRTEQDDFWAWAWDRTGIFTVRSAYRELIQRCGLSEPATGSSTGDE-ATW 126

Query: 177 KKLWQLKIPPKVKDFIWRAVNHCLPTKMNLQGKHVPINTLCPFCDIYNEMTIHCLVSCD 1
           K LW+L+I PK++ F WR V + LP    L+  H+   + CP C   NE   H LV C+
Sbjct: 127 KALWRLRIMPKIRVFWWRVVKNLLPCAAELRRSHMKEISNCPLCGNDNETKFHALVECE 185


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