BLASTX nr result

ID: Bupleurum21_contig00035615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035615
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37820.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   192   2e-47
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   190   9e-47
ref|XP_003637117.1| Pentatricopeptide repeat-containing protein,...   188   3e-46

>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  193 bits (490), Expect = 1e-47
 Identities = 88/119 (73%), Positives = 106/119 (89%)
 Frame = +2

Query: 2   WNAMIGGYASHGFAEEALKLFGAMRTVRVQPTYITFISVLSACAHAGLVDQAKMHFEAMV 181
           WNAMIGGYA HGFA +AL+LF  M+ ++V+PTYITFISVL+ACAHAG V + +MHF++M 
Sbjct: 324 WNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMA 383

Query: 182 HEFGIQPRVEHFASLVDVVGRQGQVEEAMDIINRMPVEPDKAVWGALLGACRVHDNVKL 358
            EFGI+PR+EHFASLVD+VGR GQ+EEAMD+IN MP EPDKAVWGALLGACRVH+NV+L
Sbjct: 384 CEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVEL 442


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  193 bits (490), Expect = 1e-47
 Identities = 88/119 (73%), Positives = 106/119 (89%)
 Frame = +2

Query: 2   WNAMIGGYASHGFAEEALKLFGAMRTVRVQPTYITFISVLSACAHAGLVDQAKMHFEAMV 181
           WNAMIGGYA HGFA +AL+LF  M+ ++V+PTYITFISVL+ACAHAG V + +MHF++M 
Sbjct: 501 WNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMA 560

Query: 182 HEFGIQPRVEHFASLVDVVGRQGQVEEAMDIINRMPVEPDKAVWGALLGACRVHDNVKL 358
            EFGI+PR+EHFASLVD+VGR GQ+EEAMD+IN MP EPDKAVWGALLGACRVH+NV+L
Sbjct: 561 CEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVEL 619


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/119 (73%), Positives = 106/119 (89%)
 Frame = +2

Query: 2   WNAMIGGYASHGFAEEALKLFGAMRTVRVQPTYITFISVLSACAHAGLVDQAKMHFEAMV 181
           WNAMIGGYA HGFA +AL+LF  M+ ++V+PTYITFISVL+ACAHAG V + +MHF++M 
Sbjct: 501 WNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGXVKEGRMHFKSMA 560

Query: 182 HEFGIQPRVEHFASLVDVVGRQGQVEEAMDIINRMPVEPDKAVWGALLGACRVHDNVKL 358
            EFGI+PR+EHFASLVD+VGR GQ+EEAMD+IN MP EPDKAVWGALLGACRVH+NV+L
Sbjct: 561 CEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVEL 619


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  190 bits (483), Expect = 9e-47
 Identities = 87/119 (73%), Positives = 108/119 (90%)
 Frame = +2

Query: 2   WNAMIGGYASHGFAEEALKLFGAMRTVRVQPTYITFISVLSACAHAGLVDQAKMHFEAMV 181
           WNAMIGGYASHG+A EAL+LF  MR+ +VQPTYITFISVL+ACAHAGLV++ +  FE+MV
Sbjct: 483 WNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRIFESMV 542

Query: 182 HEFGIQPRVEHFASLVDVVGRQGQVEEAMDIINRMPVEPDKAVWGALLGACRVHDNVKL 358
            ++G++PRVEHFASLVD+VGRQGQ+EEA+D+IN M +EPDKAVWGALLGA RVH+NV++
Sbjct: 543 SDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVHNNVEM 601


>ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503052|gb|AES84255.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 592

 Score =  188 bits (478), Expect = 3e-46
 Identities = 85/119 (71%), Positives = 106/119 (89%)
 Frame = +2

Query: 2   WNAMIGGYASHGFAEEALKLFGAMRTVRVQPTYITFISVLSACAHAGLVDQAKMHFEAMV 181
           WNAMIGGYA HGFA +AL+LF  M+ +++QPTYITFISVL+ACAHAGLV++ K  F +M+
Sbjct: 474 WNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMI 533

Query: 182 HEFGIQPRVEHFASLVDVVGRQGQVEEAMDIINRMPVEPDKAVWGALLGACRVHDNVKL 358
           +++GI+PRVEHFASLVD++GRQGQ++EAMD+I  MPV+PDKAVWGALLGACRVH NV L
Sbjct: 534 NDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDL 592


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