BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035614
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    81   1e-13
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
ref|XP_002527468.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    70   1e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    70   2e-10

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/124 (33%), Positives = 60/124 (48%)
 Frame = +2

Query: 44  VCWSLWKCRNEIVWNQRSMEVTEVVMSANSILSQWLSAQDKFFDTSLGFMTQEDGGEHWS 223
           VCW LW  RN++VWN R     +VV    ++L  W  A     +T    +T       W 
Sbjct: 610 VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHAN----ETLATAVTVPSYSSKWQ 665

Query: 224 IPDYNMVKVNTDAAIFEASNTYSYSMIARNHAGELIEAVSKGERGNIRPEIAEAIGIREA 403
            PDY  +K+N D A+F      +   + R+H G  +   +K       P++ EA+G+RE 
Sbjct: 666 KPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREV 723

Query: 404 LSWI 415
           LSWI
Sbjct: 724 LSWI 727


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
 Frame = +2

Query: 35  IVMVCWSLWKCRNEIVWNQRSMEVTEVVMSANSILSQWLSAQ--DKFFDTSLGFMTQEDG 208
           + +VC SLW  RN  VWN++S     V+  AN +L Q   AQ  D+     LG  T  D 
Sbjct: 527 MALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNT--DV 584

Query: 209 GEHWSIPDYNMVKVNTDAAIFEASNTYSYSMIARNHAGELIEAVSKGERGNIRPEIAEAI 388
              W+ P+   +K+NTD A+F          + R+  G +I A S+   G      AEA+
Sbjct: 585 TRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEAL 644

Query: 389 GIREALSWIK 418
            ++EALS++K
Sbjct: 645 SMKEALSYMK 654


>ref|XP_002527468.1| conserved hypothetical protein [Ricinus communis]
           gi|223533108|gb|EEF34866.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 158

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/126 (30%), Positives = 65/126 (51%)
 Frame = +2

Query: 41  MVCWSLWKCRNEIVWNQRSMEVTEVVMSANSILSQWLSAQDKFFDTSLGFMTQEDGGEHW 220
           M+CWS+W  RNE++W  +    ++++    ++ + WL+A + +  +S            W
Sbjct: 1   MICWSIWSSRNELIWEGKRKGNSQILQGELNLFTNWLAATETYQPSS----ATSSPLLPW 56

Query: 221 SIPDYNMVKVNTDAAIFEASNTYSYSMIARNHAGELIEAVSKGERGNIRPEIAEAIGIRE 400
             P    +K N DAA F     + +  + R+HAG L + +    R  +RP   EA+G+RE
Sbjct: 57  QKPQLGYLKYNVDAATFNGRTGFGF--VLRDHAGLLFQQLMDLRR--LRPH-TEAMGLRE 111

Query: 401 ALSWIK 418
            LSW+K
Sbjct: 112 TLSWLK 117


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   FNRYTGRDIQIIVMVCWSLWKCRNEIVWNQRSMEVTEVVMSANSILSQWLSAQDKFFDTS 181
           F ++       I  + W+LW  RNE+VWN +  +  ++V  A + L +WL AQ     + 
Sbjct: 130 FTKFDKSTWHCIAAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSP 189

Query: 182 LGFMTQEDGGEHWSIPDYNMVKVNTDAAIFEASNTYSYSMIARNHAGELIEA-VSKGERG 358
                       W  P    +K N DA+ F          + RN  G L+ A ++   + 
Sbjct: 190 DNNEVFNHNLAKWKKPKSGSLKCNVDASTFNQQGMIGAGYVLRNTEGALLGARITSFVQS 249

Query: 359 NIRPEIAEAIGIREALSWIK 418
           ++  ++AEA+  REALSW K
Sbjct: 250 DLNLKLAEALSFREALSWTK 269


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/125 (30%), Positives = 62/125 (49%)
 Frame = +2

Query: 41  MVCWSLWKCRNEIVWNQRSMEVTEVVMSANSILSQWLSAQDKFFDTSLGFMTQEDGGEHW 220
           M+ W +W+ RN+ VW+ +       V  A  +L QW +A++    T +    Q+     W
Sbjct: 1   MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSA-TTQVQQSPQDTIA--W 57

Query: 221 SIPDYNMVKVNTDAAIFEASNTYSYSMIARNHAGELIEAVSKGERGNIRPEIAEAIGIRE 400
             P    +K N DAAIF   N +   M  R+  G  ++A +    G   P+ AEA+G+R+
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 401 ALSWI 415
           A+ W+
Sbjct: 118 AILWL 122