BLASTX nr result

ID: Bupleurum21_contig00035606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035606
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp....    58   7e-07
ref|XP_001774713.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...    56   4e-06
ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Gl...    55   5e-06

>ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339190|gb|EFH69607.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 73   KLVQLNL-SCNHMNRLPHLSKMKGLEELKLTNCSSLKEIQGLEDLTSIRKLHLGGCSSS 246
            KL QLNL +C  ++ +  LSK+K L EL LTNC  + +I GLE LT+++KL++ GC+SS
Sbjct: 1232 KLEQLNLENCFSLDSIFDLSKLKILHELNLTNCVKVVDIPGLEHLTALKKLYMSGCNSS 1290


>ref|XP_001774713.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674013|gb|EDQ60528.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 529

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
 Frame = +1

Query: 4   SLKEFDAEKLN-VSRLPDSIECLSKLVQLNLS-CNHMNRLPH-LSKMKGLEELKLTNCSS 174
           SLKE D    + + RLP+ +E LS L++L+LS C+ +  LP+ L  +  LEEL L++CSS
Sbjct: 67  SLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDLSHCSS 126

Query: 175 LKEIQG-LEDLTSIRKLHLGGCSS 243
           L  +   L +L+S+ +L L GCSS
Sbjct: 127 LINLPNELANLSSLTRLVLSGCSS 150


>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
            gi|355522600|gb|AET03054.1| Leucine-rich
            repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 22/101 (21%)
 Frame = +1

Query: 7    LKEFDAEKLNVSRLPDSIECLSKLVQLNL-SCNHMNRLPHL------------------- 126
            LK  +  + N   LP S++ LS L +L+L +C  +  LP L                   
Sbjct: 869  LKTLNLGQNNFHSLPSSLKGLSILKELSLPNCTELISLPSLPSSLIMLNADNCYALETIH 928

Query: 127  --SKMKGLEELKLTNCSSLKEIQGLEDLTSIRKLHLGGCSS 243
              S ++ LEELKLTNC  L +I GLE L S+R+L+L GC++
Sbjct: 929  DMSNLESLEELKLTNCKKLIDIPGLECLKSLRRLYLSGCNA 969


>ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
 Frame = +1

Query: 31   LNVSRLPDSIECLS------KLVQLNL-SCNHMNRLPHLSKMKGLEELKLTNCSSLKEIQ 189
            L V  LP+  + +S       L++LN+ +C  +  +  +S ++ L+ELKLTNC  +++I 
Sbjct: 1112 LKVLSLPNCTQLISLPSLPSSLIELNVENCYALETIHDMSNLESLKELKLTNCVKVRDIP 1171

Query: 190  GLEDLTSIRKLHLGGC 237
            GLE L S+R+L+L GC
Sbjct: 1172 GLEGLKSLRRLYLSGC 1187


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