BLASTX nr result

ID: Bupleurum21_contig00035582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035582
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   109   4e-23
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   1e-10

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  109 bits (272), Expect(2) = 4e-23
 Identities = 65/171 (38%), Positives = 84/171 (49%)
 Frame = -3

Query: 585  LFKCKHAISIWANSEFVTLIEEAPDESYGDCFRWMAV*LAREKLRKFASLCWAA*FCRNK 406
            LF C  A +IW  S F +L+  AP  S+ +   W+A    +E+ R   S  WA  FCRNK
Sbjct: 1100 LFDCTFARAIWQVSGFASLMMNAPLSSFSERLEWLAKHATKEEFRTMCSFMWAGWFCRNK 1159

Query: 405  DYFDHAASMDALSIAQGFVKLNDDYCHYKTKVCVTRSSSSNKKVNKWFPPTQSNVKINVD 226
              F++  S DA  +A+ F KL  DYC Y   V              W PP     K+N D
Sbjct: 1160 LIFENELS-DAPLVAKRFSKLVADYCEYAGSVFRGSGGGCGSSA-LWSPPPTGMFKVNFD 1217

Query: 225  AHIKGNAGVAFGVAMCDGSGNLIAAAVKTWEARWTSDMAEAGAARYGLEVA 73
            AH+  N  V  GV +    G +    VK   ARWT+ MAEA AA + +EVA
Sbjct: 1218 AHLSPNGEVGLGVVIRANDGGIKMLGVKRVAARWTAVMAEAMAALFAVEVA 1268



 Score = 25.4 bits (54), Expect(2) = 4e-23
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 653  RHLQEFMRCKICDNGDEPIMHAFY 582
            RH+     C +C + DE I HA +
Sbjct: 1078 RHISVDATCSVCGDPDESINHALF 1101


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 63.2 bits (152), Expect(2) = 1e-10
 Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
 Frame = -3

Query: 582  FKCKHAISIWANSEFVTLIEEAPDESYGDCF-RWMAV*LAREKLRKFASLCWAA*FCRNK 406
            ++C  ++ +W       L+    DE+  D   RW    +  + ++K   + W     RN+
Sbjct: 1095 YRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWSQ--MDAKVVQKGCYILWNVWVERNR 1152

Query: 405  DYFDHAASMDALSIAQGFVKLNDDYCHYKTKVCVTRSSSSNKKVNKWFPPTQSNVKINVD 226
              F+H  S  A  + Q  ++  +D+ +Y  K+     SS+    ++W+ P    +K+N D
Sbjct: 1153 RVFEHT-SQPATVVGQRIMRQVEDFNNYAVKIYGGMRSSAALSPSRWYAPPVGAIKLNTD 1211

Query: 225  AHIKGNAGVAFGVAMCDGSGNLIAAAVKTWEARWTSDMAEAGAARYGLEVAR 70
            A +     V  GV   D  G +  AA +   A W  ++AE  A      +A+
Sbjct: 1212 ASLAEEGWVGLGVIARDSEGKVCFAATRRVRAYWPPEVAECKAIYMATRLAQ 1263



 Score = 29.6 bits (65), Expect(2) = 1e-10
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 674  IMEVLNRRHLQEFMRCKICDNGDEPIMHAFY 582
            + +VL RRHL +   C  C   DE   H FY
Sbjct: 1065 VRKVLQRRHLIDEAGCPCCAREDETQFHLFY 1095


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