BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035552
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   198   4e-49
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  203 bits (517), Expect = 1e-50
 Identities = 89/114 (78%), Positives = 102/114 (89%)
 Frame = -2

Query: 344 IERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRF 165
           IERG  PD WSYN I AFHCDH EVN AL+L+SRME + C PDRHTYNMVLKML+++GRF
Sbjct: 351 IERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRF 410

Query: 164 DKVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPPY 3
           D+VT+VW  ME++GFYP+ASTYAVMVHGFCKK+GKLEEACKYFEMMI+DGIPPY
Sbjct: 411 DRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPY 464



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/112 (29%), Positives = 54/112 (48%)
 Frame = -2

Query: 341 ERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRFD 162
           ERG   D  +YN++L   C    V+ A KL   M ++   PD  +Y++ ++   ++    
Sbjct: 247 ERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 306

Query: 161 KVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPP 6
               V D M +    P+  TY  +V   CK   K++EA +  + MIE G+ P
Sbjct: 307 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSE-KVDEAYQLLDEMIERGVSP 357


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  203 bits (517), Expect = 1e-50
 Identities = 89/114 (78%), Positives = 102/114 (89%)
 Frame = -2

Query: 344 IERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRF 165
           IERG  PD WSYN I AFHCDH EVN AL+L+SRME + C PDRHTYNMVLKML+++GRF
Sbjct: 324 IERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRF 383

Query: 164 DKVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPPY 3
           D+VT+VW  ME++GFYP+ASTYAVMVHGFCKK+GKLEEACKYFEMMI+DGIPPY
Sbjct: 384 DRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPY 437



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/112 (29%), Positives = 54/112 (48%)
 Frame = -2

Query: 341 ERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRFD 162
           ERG   D  +YN++L   C    V+ A KL   M ++   PD  +Y++ ++   ++    
Sbjct: 220 ERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIH 279

Query: 161 KVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPP 6
               V D M +    P+  TY  +V   CK   K++EA +  + MIE G+ P
Sbjct: 280 SAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSE-KVDEAYQLLDEMIERGVSP 330


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/114 (77%), Positives = 99/114 (86%)
 Frame = -2

Query: 344 IERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRF 165
           I RG KPDTWSYN I A+HCDH EVN AL+L+ RME D C PDRHTYNMVLK+LI+IGRF
Sbjct: 348 ISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRF 407

Query: 164 DKVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPPY 3
           DKVT VW+NM  K FYPS STY+VM+HGFCKK+GKLEEACKYFEMMI++GIPPY
Sbjct: 408 DKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPY 461


>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  194 bits (494), Expect = 5e-48
 Identities = 86/114 (75%), Positives = 98/114 (85%)
 Frame = -2

Query: 344 IERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRF 165
           I RG +PDTWSYN I A+HCDH EVN A++L+ RME D C PDRHTYNMVLK+LI+IGRF
Sbjct: 348 ISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRF 407

Query: 164 DKVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPPY 3
           DKVT VW NM  K FYPS STY+VM+HGFCKK+GKLEEACKYFEMMI++GIPPY
Sbjct: 408 DKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPY 461


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  192 bits (489), Expect = 2e-47
 Identities = 82/114 (71%), Positives = 97/114 (85%)
 Frame = -2

Query: 344 IERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRF 165
           IERG  PDTWSYN I A+HCDH EVN AL LV RM+ D C PD+HTYNMVLK+L+++GRF
Sbjct: 352 IERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRF 411

Query: 164 DKVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPPY 3
           D+   VW++M K+GFYPS STYAVM+HGFCKK+ KLEEACKYFEMMI++GIPPY
Sbjct: 412 DRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPY 465



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/112 (27%), Positives = 56/112 (50%)
 Frame = -2

Query: 341 ERGAKPDTWSYNTILAFHCDHQEVNMALKLVSRMEADACQPDRHTYNMVLKMLIKIGRFD 162
           ERG   D  +YN++L   C   + + A K+   M+++   PD  TY++ ++   +     
Sbjct: 248 ERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLH 307

Query: 161 KVTNVWDNMEKKGFYPSASTYAVMVHGFCKKRGKLEEACKYFEMMIEDGIPP 6
            V  V +  ++K   P+  TY  ++   CK +  +EEA +  + MIE G+ P
Sbjct: 308 TVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ-NVEEAYQILDEMIERGVTP 358