BLASTX nr result

ID: Bupleurum21_contig00035550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035550
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24668.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-l...    66   3e-09
gb|AFK43843.1| unknown [Medicago truncatula]                           59   4e-07
ref|XP_003608060.1| Something about silencing protein [Medicago ...    59   4e-07
gb|ABI34329.1| Integrase core domain containing protein [Solanum...    59   5e-07

>emb|CBI24668.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -3

Query: 267 PEILFDGKRHITQQMEKNRGLTRARKKLSKNPRKKYK 157
           PEIL DGKR I+ QMEKN+GLTRARKKL+KNPRKKYK
Sbjct: 640 PEILEDGKRQISYQMEKNKGLTRARKKLTKNPRKKYK 676


>ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-like [Vitis vinifera]
          Length = 669

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -3

Query: 267 PEILFDGKRHITQQMEKNRGLTRARKKLSKNPRKKYK 157
           PEIL DGKR I+ QMEKN+GLTRARKKL+KNPRKKYK
Sbjct: 590 PEILEDGKRQISYQMEKNKGLTRARKKLTKNPRKKYK 626


>gb|AFK43843.1| unknown [Medicago truncatula]
          Length = 152

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -3

Query: 276 PVLPEILFDGKRHITQQMEKNRGLTRARKKLSKNPRKKYK 157
           P LPE   DGKR+IT QM KNRGLTR+R K  KNPRK YK
Sbjct: 70  PSLPEETADGKRYITSQMSKNRGLTRSRNKDKKNPRKNYK 109


>ref|XP_003608060.1| Something about silencing protein [Medicago truncatula]
           gi|355509115|gb|AES90257.1| Something about silencing
           protein [Medicago truncatula]
          Length = 653

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -3

Query: 276 PVLPEILFDGKRHITQQMEKNRGLTRARKKLSKNPRKKYK 157
           P LPE   DGKR+IT QM KNRGLTR+R K  KNPRK YK
Sbjct: 571 PSLPEETADGKRYITSQMSKNRGLTRSRNKDKKNPRKNYK 610


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = -3

Query: 267  PEILFDGKRHITQQMEKNRGLTRARKKLSKNPRKKYK 157
            PE + DGKR I  QMEKNRGLTR RKK  KNPRKKY+
Sbjct: 1696 PETVVDGKRQINYQMEKNRGLTRNRKKQDKNPRKKYR 1732


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