BLASTX nr result

ID: Bupleurum21_contig00035530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035530
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...    61   8e-08
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]    60   2e-07
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
 Frame = +3

Query: 3   KNMKKVGDDSGRKKIEFPRSSATALSFGIIDSLCDSDEDNLQVEQSR---PALNQKL-VT 170
           +  KK+G   GR+KIE  RSS ++  F I+DSLC SDE++  +E+ R    +LN  L  +
Sbjct: 96  RKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSDLNAS 155

Query: 171 SLNKACN-------------LQGFVDQHFSPLLELGLSSEANQSTDKVEMQMCKDFKGIC 311
           S+ K C+              +G     FS  + L L +  N S +  E    +D K  C
Sbjct: 156 SVRKPCSQVFSLPSSPGHFLTRGGSSDGFSE-IGLNLDNRENHSAESAERDSIRDSKFKC 214

Query: 312 DPVVRPIRD 338
           D VV P  D
Sbjct: 215 DDVVGPQND 223


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
 Frame = +3

Query: 3   KNMKKVGDDSGRKKIEFPRSSATALSFGIIDSLCDSDEDNLQVEQSR---PALNQKL-VT 170
           +  KK+G   GR+KIE  RSS ++  F I+DSLC SDE++  +E+ R    +LN  L  +
Sbjct: 275 RKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSDLNAS 334

Query: 171 SLNKACN--------------LQGFVDQHFSPLLELGLSSEANQSTDKVEMQMCKDFKGI 308
           S+ K C+                G  D  F   + L L +  N S +  E    +D K  
Sbjct: 335 SVRKPCSQVFSLPSSPGHFLTRGGSSDGFFE--IGLNLDNRENHSAESAERDSIRDSKFK 392

Query: 309 CDPVVRPIRD 338
           CD VV P  D
Sbjct: 393 CDDVVGPQND 402


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   KNMKKVGDDSGRKKIEFPRSSATALSFGIIDSLCDSDEDNLQVEQSRPALNQKL-VTSLN 179
           + MKK+G D  RKKIE  + S T  SF I+DSLC S+E+N Q   S   LN  L   S  
Sbjct: 90  RKMKKMGIDEERKKIELSQDSDTTFSFNIVDSLCSSNEENSQKRSSALCLNSNLNPESTR 149

Query: 180 KACNLQGFVDQHF 218
           K C      D  F
Sbjct: 150 KPCTESSLSDDFF 162


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