BLASTX nr result

ID: Bupleurum21_contig00035526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035526
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    78   9e-13
ref|XP_003609437.1| hypothetical protein MTR_4g115700 [Medicago ...    70   2e-10
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    69   5e-10
ref|XP_003622056.1| hypothetical protein MTR_7g026730 [Medicago ...    63   3e-08
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    62   5e-08

>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/99 (42%), Positives = 58/99 (58%)
 Frame = +1

Query: 40  AEAIGVREALSWIKARHLQHTKVLVETDSLLTVQGINSRTMNCLEVGEVLRRCRLLIQDL 219
           AEAIG+REA+ W+ +  L  + V+ E D+ + V  + S   +  E G V+  CRLL+Q  
Sbjct: 221 AEAIGLREAVQWVLS--LGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHG 278

Query: 220 PGVSIHFIRKQANRVAHEFARIPCLANSHNLFMSPPTCM 336
              S+ FIRKQAN VAH  AR   L +  N+F  PP C+
Sbjct: 279 CNYSVQFIRKQANLVAHSLARASHLQDGFNMFSVPPDCI 317


>ref|XP_003609437.1| hypothetical protein MTR_4g115700 [Medicago truncatula]
           gi|355510492|gb|AES91634.1| hypothetical protein
           MTR_4g115700 [Medicago truncatula]
          Length = 111

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/95 (41%), Positives = 54/95 (56%)
 Frame = +1

Query: 37  EAEAIGVREALSWIKARHLQHTKVLVETDSLLTVQGINSRTMNCLEVGEVLRRCRLLIQD 216
           EAEA+G+R+A+ W+   HL  +KV +E D  L V+ I  RT +  E G +L  CR L+Q 
Sbjct: 13  EAEALGLRDAIIWLG--HLGMSKVHIELDCKLVVESIGDRTKDQSEFGNILATCRDLLQH 70

Query: 217 LPGVSIHFIRKQANRVAHEFARIPCLANSHNLFMS 321
            P   I FIR+QAN V H      CL  +   +M+
Sbjct: 71  FPNFKISFIRRQANYVVH------CLVRTAKFYMT 99


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/102 (36%), Positives = 55/102 (53%)
 Frame = +1

Query: 37  EAEAIGVREALSWIKARHLQHTKVLVETDSLLTVQGINSRTMNCLEVGEVLRRCRLLIQD 216
           EAEA+G+R+A+ W+    L+ + V +E D  L V  I  +  N  E G ++  CR L+Q 
Sbjct: 109 EAEAVGLRDAILWLG--QLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQ 166

Query: 217 LPGVSIHFIRKQANRVAHEFARIPCLANSHNLFMSPPTCMVE 342
                I F+R+QAN VAH FAR+        L  + P  ++E
Sbjct: 167 FTNFKISFVRRQANVVAHSFARVSIFQPLFGLAFAKPESILE 208


>ref|XP_003622056.1| hypothetical protein MTR_7g026730 [Medicago truncatula]
           gi|355497071|gb|AES78274.1| hypothetical protein
           MTR_7g026730 [Medicago truncatula]
          Length = 132

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/98 (35%), Positives = 53/98 (54%)
 Frame = +1

Query: 37  EAEAIGVREALSWIKARHLQHTKVLVETDSLLTVQGINSRTMNCLEVGEVLRRCRLLIQD 216
           EAEA+G+R+A+ W    +L  +KV VE    L V  I   + N LE G ++  CR+++Q 
Sbjct: 26  EAEALGLRDAILWFG--NLGLSKVHVELYCKLVVDNIVDNSKNELEFGNIIAICRIMLQQ 83

Query: 217 LPGVSIHFIRKQANRVAHEFARIPCLANSHNLFMSPPT 330
            P   I+F+ +QAN V H   +   L   H +F   P+
Sbjct: 84  HPNFKINFVMRQANCVTHSLTKASKLYTRHQIFNLIPS 121


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = +1

Query: 43   EAIGVREALSWIKARHLQHTKVLVETDSLLTVQGINSRTMNCLEVGEVLRRCRLLIQDLP 222
            EA+GVRE LSWI  R    ++++VETD LL VQ I  ++   +  G ++  C  ++Q L 
Sbjct: 1689 EALGVREVLSWIHER--SRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHLV 1746

Query: 223  GVSIHFIRKQANRVAHEFARIPCLANSHNLFMS-------PPTCMV 339
             V + + R+ AN  AH      CLA     F S       PP C++
Sbjct: 1747 DVQVVYARRSANSAAH------CLAKGAGSFTSLHIWGYTPPQCIL 1786


Top