BLASTX nr result

ID: Bupleurum21_contig00035522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035522
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
emb|CBI27471.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   145   3e-33
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              142   4e-32

>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score =  149 bits (375), Expect = 3e-34
 Identities = 66/119 (55%), Positives = 89/119 (74%)
 Frame = -2

Query: 357 EALEFFSRMQNAGIQPNAVTFIGVLSACSYAGLVEEGKRVFSAMSEIYGIIPRSEHFGCM 178
           EAL++F++MQ AGI PN++TF  +L+ACS+AGL EEGK +F +MS +Y I P  EH+GCM
Sbjct: 326 EALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCM 385

Query: 177 VDVLARAGLLKEAEHFIHNLPDKADAGVWGPLLGGCILHNDVHKGEKVAKILIELNPSH 1
           VD++ RAGLLKEA  FI ++P K +A +WG LL  C LH     G+++ KILIEL+P H
Sbjct: 386 VDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDH 444


>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/119 (53%), Positives = 89/119 (74%)
 Frame = -2

Query: 357 EALEFFSRMQNAGIQPNAVTFIGVLSACSYAGLVEEGKRVFSAMSEIYGIIPRSEHFGCM 178
           EALE+F +MQ AG++PN +TF G+L+ACS+AGLV E K +F +M  I+G  P  EH+GCM
Sbjct: 286 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCM 345

Query: 177 VDVLARAGLLKEAEHFIHNLPDKADAGVWGPLLGGCILHNDVHKGEKVAKILIELNPSH 1
           VD+L RAGLLKEAE  I N+P K +A +WG LL  C +H ++  G+++ KILI+++P H
Sbjct: 346 VDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGH 404


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/119 (53%), Positives = 89/119 (74%)
 Frame = -2

Query: 357 EALEFFSRMQNAGIQPNAVTFIGVLSACSYAGLVEEGKRVFSAMSEIYGIIPRSEHFGCM 178
           EALE+F +MQ AG++PN +TF G+L+ACS+AGLV E K +F +M  I+G  P  EH+GCM
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCM 393

Query: 177 VDVLARAGLLKEAEHFIHNLPDKADAGVWGPLLGGCILHNDVHKGEKVAKILIELNPSH 1
           VD+L RAGLLKEAE  I N+P K +A +WG LL  C +H ++  G+++ KILI+++P H
Sbjct: 394 VDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGH 452


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/119 (53%), Positives = 89/119 (74%)
 Frame = -2

Query: 357 EALEFFSRMQNAGIQPNAVTFIGVLSACSYAGLVEEGKRVFSAMSEIYGIIPRSEHFGCM 178
           EALE+F +MQ AG++PN +TF G+L+ACS+AGLV E K +F +M  I+G  P  EH+GCM
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCM 393

Query: 177 VDVLARAGLLKEAEHFIHNLPDKADAGVWGPLLGGCILHNDVHKGEKVAKILIELNPSH 1
           VD+L RAGLLKEAE  I N+P K +A +WG LL  C +H ++  G+++ KILI+++P H
Sbjct: 394 VDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGH 452


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/119 (56%), Positives = 86/119 (72%)
 Frame = -2

Query: 363 ANEALEFFSRMQNAGIQPNAVTFIGVLSACSYAGLVEEGKRVFSAMSEIYGIIPRSEHFG 184
           A EAL  FS M   GI+PN VTFIG+L ACS+ GL+ EG+R F++M+  YGIIP+ EH+G
Sbjct: 309 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYG 368

Query: 183 CMVDVLARAGLLKEAEHFIHNLPDKADAGVWGPLLGGCILHNDVHKGEKVAKILIELNP 7
           CMVD+L+RAGLL EA  FI N+P K +  VWG LLG C +H +V   E+  K L+EL+P
Sbjct: 369 CMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 427


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