BLASTX nr result

ID: Bupleurum21_contig00035516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035516
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...    99   4e-19
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    99   4e-19
ref|XP_002872457.1| hypothetical protein ARALYDRAFT_489822 [Arab...    96   3e-18
sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; A...    96   4e-18
gb|ACX37401.1| conserved telomere maintenance component 1 [Arabi...    96   4e-18

>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
 Frame = -1

Query: 492 LLSISELVHQCRPLTGAYSL----SSSNQKPKLHRFDEKHDQSSSASTN------PKTLK 343
           ++SISELV   RPLT   +L    S+S+  P +       + +   ST       P+ L 
Sbjct: 24  MVSISELVQGRRPLTATSTLHSPPSTSSHTPPISSSSSFPNSNLPPSTPAGGVTAPRILT 83

Query: 342 PLNYPTVLVGTLILPVHKILTMSTSNSGLVCSKIXXXXXXXXXXXXXXDILEFDPRVIGK 163
           PLN+P+ L+GTL LP +   T +       CS                D+L  D R+IG 
Sbjct: 84  PLNHPSYLIGTLALPSYLHSTPALP----CCSHSTCFVFSDASSTVCCDVLHLDLRIIGN 139

Query: 162 KINVLAWNYIPFKCGGGFLEIIKWDFVESSSLLIPCSSKLDSFPLSLEFSGNAK 1
           +I VL+WN+IP KC GGFLEII+W F++S++ L  CS+ LD+FPL L  S ++K
Sbjct: 140 RIRVLSWNFIPSKC-GGFLEIIRWSFLDSTARLSRCSN-LDAFPLVLGSSSDSK 191


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
 Frame = -1

Query: 492 LLSISELVHQCRPLTGAYSL----SSSNQKPKLHRFDEKHDQSSSASTN------PKTLK 343
           ++SISELV   RPLT   +L    S+S+  P +       + +   ST       P+ L 
Sbjct: 166 MVSISELVQGRRPLTATSTLHSPPSTSSHTPPISSSSSFPNSNLPPSTPAGGVTAPRILT 225

Query: 342 PLNYPTVLVGTLILPVHKILTMSTSNSGLVCSKIXXXXXXXXXXXXXXDILEFDPRVIGK 163
           PLN+P+ L+GTL LP +   T +       CS                D+L  D R+IG 
Sbjct: 226 PLNHPSXLIGTLXLPSYLHSTPALP----CCSHSTCFVFSDASSTVCCDVLHLDLRIIGN 281

Query: 162 KINVLAWNYIPFKCGGGFLEIIKWDFVESSSLLIPCSSKLDSFPLSLEFSGNAK 1
           +I VL+WN+IP KC GGFLEII+W F++S++ L  CS+ LD+FPL L  S ++K
Sbjct: 282 RIRVLSWNFIPSKC-GGFLEIIRWSFLDSTARLSRCSN-LDAFPLVLGSSSDSK 333


>ref|XP_002872457.1| hypothetical protein ARALYDRAFT_489822 [Arabidopsis lyrata subsp.
           lyrata] gi|297318294|gb|EFH48716.1| hypothetical protein
           ARALYDRAFT_489822 [Arabidopsis lyrata subsp. lyrata]
          Length = 1062

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 59/150 (39%), Positives = 79/150 (52%)
 Frame = -1

Query: 492 LLSISELVHQCRPLTGAYSLSSSNQKPKLHRFDEKHDQSSSASTNPKTLKPLNYPTVLVG 313
           +L+I+ELVH+ R +TG+ SL  S   P  H   E H  +  +  + K L PLN+P V+VG
Sbjct: 6   ILTIAELVHKGRAVTGSSSLFFSAATPTPHSSSESHPGAVDSDFSRKFLAPLNHPAVIVG 65

Query: 312 TLILPVHKILTMSTSNSGLVCSKIXXXXXXXXXXXXXXDILEFDPRVIGKKINVLAWNYI 133
           TL LP          +  L C                 DIL F+ R IG  I VL+WN++
Sbjct: 66  TLALP----------SETLKCPNRYCFRFSDGDLTICCDILRFEIRAIGSTICVLSWNFL 115

Query: 132 PFKCGGGFLEIIKWDFVESSSLLIPCSSKL 43
           P K   GFLEIIKW FV++ +L+  CS  L
Sbjct: 116 PMKHCCGFLEIIKWKFVDTDNLVSRCSFPL 145


>sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; AltName: Full=Protein
           CONSERVED TELOMERE MAINTENANCE COMPONENT 1; Short=AtCTC1
          Length = 1272

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
 Frame = -1

Query: 492 LLSISELVHQCRPLTGAYSLSSSNQKPKLHRFDEKHDQSSSASTNPKT------------ 349
           +L++ +LV++   +TGA SL SS            H  S S STNPK+            
Sbjct: 6   ILTVKDLVNEGIAVTGASSLFSSAAS---------HSSSESTSTNPKSHPGAVDSDFSRK 56

Query: 348 -LKPLNYPTVLVGTLILPVHKILTMSTSNSGLVCSKIXXXXXXXXXXXXXXDILEFDPRV 172
            L PLNYPTV+ GT+ LP          +  L C                 DIL F+ R 
Sbjct: 57  FLTPLNYPTVIFGTVALP----------SETLKCPNRYCFRFTDGDLTICCDILGFEFRA 106

Query: 171 IGKKINVLAWNYIPFKCGGGFLEIIKWDFVESSSLLIPCSSKLDSFPL 28
           IG KI VL+WN++P    GGFLEII W FV+S SLL  CS  + SFPL
Sbjct: 107 IGSKICVLSWNFLPMNHSGGFLEIINWKFVDSGSLLSRCSG-ISSFPL 153


>gb|ACX37401.1| conserved telomere maintenance component 1 [Arabidopsis thaliana]
          Length = 1272

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 66/168 (39%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
 Frame = -1

Query: 492 LLSISELVHQCRPLTGAYSLSSSNQKPKLHRFDEKHDQSSSASTNPKT------------ 349
           +L++ +LV++   +TGA SL SS            H  S S STNPK+            
Sbjct: 6   ILTVKDLVNEGIAVTGASSLFSSAAS---------HSSSESTSTNPKSHPGAVDSDFSRK 56

Query: 348 -LKPLNYPTVLVGTLILPVHKILTMSTSNSGLVCSKIXXXXXXXXXXXXXXDILEFDPRV 172
            L PLNYPTV+ GT+ LP          +  L C                 DIL F+ R 
Sbjct: 57  FLTPLNYPTVIFGTVALP----------SETLKCPNRYCFRFTDGDLTICCDILGFEFRA 106

Query: 171 IGKKINVLAWNYIPFKCGGGFLEIIKWDFVESSSLLIPCSSKLDSFPL 28
           IG KI VL+WN++P    GGFLEII W FV+S SLL  CS  + SFPL
Sbjct: 107 IGSKICVLSWNFLPMNHSGGFLEIINWKFVDSGSLLSRCSG-ISSFPL 153


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