BLASTX nr result

ID: Bupleurum21_contig00035513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035513
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Viti...   173   1e-41
ref|XP_002320271.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002330008.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_002302793.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricin...   161   6e-38

>ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|296089826|emb|CBI39645.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  173 bits (439), Expect = 1e-41
 Identities = 74/97 (76%), Positives = 87/97 (89%)
 Frame = -3

Query: 335 DTQAFKMAWDAACQNKSATLLVPRHYTFMIQSIIFTGPCKSGLVFQIDGTVIPPEGPDSW 156
           DTQAFKM WD ACQ +SATLLVP  ++FMIQS IFTGPCK+GL+FQI+GT++ P+GP SW
Sbjct: 85  DTQAFKMTWDTACQAESATLLVPHGHSFMIQSTIFTGPCKTGLIFQIEGTIMAPDGPSSW 144

Query: 155 PTANSRRQWIVFYRINDLSLQGGGVIDGRGEKWWDLP 45
           P  NSRRQW+VFYRIN++S+QGGGVIDGRGEKWWDLP
Sbjct: 145 PQGNSRRQWLVFYRINEMSMQGGGVIDGRGEKWWDLP 181


>ref|XP_002320271.1| predicted protein [Populus trichocarpa] gi|222861044|gb|EEE98586.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  167 bits (422), Expect = 1e-39
 Identities = 74/98 (75%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
 Frame = -3

Query: 335 DTQAFKMAWDAAC-QNKSATLLVPRHYTFMIQSIIFTGPCKSGLVFQIDGTVIPPEGPDS 159
           DT AFKMAWDAAC Q+ SA +LVP  + FMIQS IFTGPC+ GLVFQ+DGT++PP+GP+S
Sbjct: 58  DTDAFKMAWDAACNQDDSAVILVPYGFEFMIQSTIFTGPCQGGLVFQVDGTLMPPDGPES 117

Query: 158 WPTANSRRQWIVFYRINDLSLQGGGVIDGRGEKWWDLP 45
           WP  NSRRQW+VFYRIN++SL GGGVIDGRGEKWWDLP
Sbjct: 118 WPQKNSRRQWLVFYRINEMSLLGGGVIDGRGEKWWDLP 155


>ref|XP_002330008.1| predicted protein [Populus trichocarpa] gi|222871433|gb|EEF08564.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  164 bits (416), Expect = 5e-39
 Identities = 72/98 (73%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
 Frame = -3

Query: 335 DTQAFKMAWDAAC-QNKSATLLVPRHYTFMIQSIIFTGPCKSGLVFQIDGTVIPPEGPDS 159
           DTQAFKMAWD AC QN+SA LL P  Y+FMIQ  IFTGPCK+ LVFQIDGT++PP+GP+S
Sbjct: 37  DTQAFKMAWDTACLQNESAILLAPDDYSFMIQPTIFTGPCKTSLVFQIDGTIMPPDGPES 96

Query: 158 WPTANSRRQWIVFYRINDLSLQGGGVIDGRGEKWWDLP 45
           WP+  ++RQW+VFYRIN +S+QGGGVIDGRGEKWW+LP
Sbjct: 97  WPSKMNKRQWLVFYRINGMSMQGGGVIDGRGEKWWNLP 134


>ref|XP_002302793.1| predicted protein [Populus trichocarpa] gi|222844519|gb|EEE82066.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  164 bits (415), Expect = 7e-39
 Identities = 74/98 (75%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
 Frame = -3

Query: 335 DTQAFKMAWDAAC-QNKSATLLVPRHYTFMIQSIIFTGPCKSGLVFQIDGTVIPPEGPDS 159
           DT AFKMAWDAAC Q   A +LVP  + FMIQS IF+GPCK GLVFQ+DGT++PP+GPDS
Sbjct: 84  DTDAFKMAWDAACNQVDPAVILVPYGFDFMIQSTIFSGPCKDGLVFQVDGTLMPPDGPDS 143

Query: 158 WPTANSRRQWIVFYRINDLSLQGGGVIDGRGEKWWDLP 45
           WP  NSRRQW+VFYRIN++SLQGGGVI GRGEKWWDLP
Sbjct: 144 WPQKNSRRQWLVFYRINEMSLQGGGVIYGRGEKWWDLP 181


>ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223548521|gb|EEF50012.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 470

 Score =  161 bits (407), Expect = 6e-38
 Identities = 71/98 (72%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
 Frame = -3

Query: 335 DTQAFKMAWDAAC-QNKSATLLVPRHYTFMIQSIIFTGPCKSGLVFQIDGTVIPPEGPDS 159
           DTQAFKMAWD+AC QN+S+ LL P  Y+F+IQ  IFTGPCKS LVFQIDGT++PP+GP S
Sbjct: 90  DTQAFKMAWDSACSQNESSILLAPSRYSFLIQPTIFTGPCKSNLVFQIDGTIMPPDGPKS 149

Query: 158 WPTANSRRQWIVFYRINDLSLQGGGVIDGRGEKWWDLP 45
           WP   S+RQW+VFYRI+ +S+QGGGVIDGRGEKWW+LP
Sbjct: 150 WPRNMSKRQWLVFYRISGMSVQGGGVIDGRGEKWWNLP 187


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