BLASTX nr result

ID: Bupleurum21_contig00035503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035503
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   171   8e-41
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   170   1e-40
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   169   2e-40
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   169   2e-40
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             169   4e-40

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  171 bits (433), Expect = 8e-41
 Identities = 83/195 (42%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
 Frame = -2

Query: 583 SKQLWLKSGDQNSKYFHAVASARKRNNQFTKLKGEDGDWHDWNSGLDQVILQYFNNLFQT 404
           S+ LW+K GD NSK+FHA+   R+  N+ T L  E+G W   +  +  + + YF NLF T
Sbjct: 124 SRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTT 183

Query: 403 STSD-WEHILECIQPSVSAEQNDMLLLPIADEEVKAALFQMHLDKSPGPDGMSPGFFQKY 227
           +    ++  L  +Q  ++   ND+L     + EV+AALF +H +K+PGPDGM+  FFQK 
Sbjct: 184 ANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKS 243

Query: 226 WSIVGKDVVDCIKDFWNTGQFSQGINETNIILIPKKKFPVKMEDLRPIALCNVVYKIASK 47
           W+I+  D++  +  F   G F + +N TNI LIPK + P +M +LRPI+LCNV YK+ SK
Sbjct: 244 WAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISK 303

Query: 46  VLANRLKNILHTVIS 2
           +L  RLK +L  +IS
Sbjct: 304 ILCQRLKTVLPNLIS 318


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/194 (43%), Positives = 115/194 (59%)
 Frame = -2

Query: 583  SKQLWLKSGDQNSKYFHAVASARKRNNQFTKLKGEDGDWHDWNSGLDQVILQYFNNLFQT 404
            +K  WL  GD NS+ FH  AS  +  N    L+GEDG  +  ++G  Q+++ YF  LF++
Sbjct: 908  AKLFWLXXGDSNSRAFHLAASKXRSRNXIANLRGEDGQMYGVDNGAKQIVVDYFEQLFRS 967

Query: 403  STSDWEHILECIQPSVSAEQNDMLLLPIADEEVKAALFQMHLDKSPGPDGMSPGFFQKYW 224
               D   +   I P +S EQN+ L  P A EE            SPG DG SP F+Q++W
Sbjct: 968  XGCDISDVQSLISPVISXEQNESLXRPFAVEE------------SPGDDGFSPXFYQRHW 1015

Query: 223  SIVGKDVVDCIKDFWNTGQFSQGINETNIILIPKKKFPVKMEDLRPIALCNVVYKIASKV 44
             IVG+ V +    + N G F   +N TNI+LIPKK   + M DLRPI+LCNV++KIASK+
Sbjct: 1016 EIVGEXVANACIGWLNDGMFPDSLNRTNIVLIPKKSEVISMTDLRPISLCNVIFKIASKL 1075

Query: 43   LANRLKNILHTVIS 2
            LANRLK +L  V+S
Sbjct: 1076 LANRLKKVLDXVVS 1089


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  169 bits (429), Expect = 2e-40
 Identities = 83/194 (42%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = -2

Query: 583 SKQLWLKSGDQNSKYFHAVASARKRNNQFTKLKGEDGDWHDWNSGLDQVILQYFNNLFQT 404
           S+Q W+KSGD+N+K+FH  AS R++ N   +++ E G+W +    + +    YF NLFQ+
Sbjct: 349 SRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQS 408

Query: 403 STS-DWEHILECIQPSVSAEQNDMLLLPIADEEVKAALFQMHLDKSPGPDGMSPGFFQKY 227
             + + + IL  ++P ++ E    L  P   EEV AAL QMH +K+PGPDGM+  F+Q +
Sbjct: 409 GNNCEMDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHF 468

Query: 226 WSIVGKDVVDCIKDFWNTGQFSQGINETNIILIPKKKFPVKMEDLRPIALCNVVYKIASK 47
           W  +G+DV   + +  N       +N+T+I+LIPKKK      D RPI+LCNV+YKI +K
Sbjct: 469 WDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAK 528

Query: 46  VLANRLKNILHTVI 5
           VLANR+K +L  VI
Sbjct: 529 VLANRMKMVLPMVI 542


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/195 (40%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
 Frame = -2

Query: 583  SKQLWLKSGDQNSKYFHAVASARKRNNQFTKLKGEDGDWHDWNSGLDQVILQYFNNLFQT 404
            S+  WLK GD+N++YFH  AS R R N   KL+  DG        L ++   +F +L+  
Sbjct: 592  SRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTK 651

Query: 403  STS-DWEHILECIQPSVSAEQNDMLLLPIADEEVKAALFQMHLDKSPGPDGMSPGFFQKY 227
              S +   +L   +P ++ E N ML  P  DEE+  ALFQ+   K+PGPDG    FFQ+ 
Sbjct: 652  DESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRN 711

Query: 226  WSIVGKDVVDCIKDFWNTGQFSQGINETNIILIPKKKFPVKMEDLRPIALCNVVYKIASK 47
            W ++ +DV++ +++F+ TG++ +G+N+T I++IPK   PV+M+D RP++LCNV+YK+ +K
Sbjct: 712  WGVLKRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAK 771

Query: 46   VLANRLKNILHTVIS 2
             L NRL+ +L  +IS
Sbjct: 772  CLVNRLRPLLQEIIS 786


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  169 bits (427), Expect = 4e-40
 Identities = 84/195 (43%), Positives = 120/195 (61%), Gaps = 1/195 (0%)
 Frame = -2

Query: 583 SKQLWLKSGDQNSKYFHAVASARKRNNQFTKLKGEDGDWHDWNSGLDQVILQYFNNLFQT 404
           S+ LW+K GD NSKYFHA+   R+  N+   L  E+G W   +  +  + + YF  LF  
Sbjct: 190 SRSLWMKVGDNNSKYFHALTKQRRARNRIIGLHDENGKWFAEDKDVQHIAVSYFETLFNK 249

Query: 403 ST-SDWEHILECIQPSVSAEQNDMLLLPIADEEVKAALFQMHLDKSPGPDGMSPGFFQKY 227
           S   +    L  ++  ++ + ND L  P  ++EV+AALF MH +K+PGPDGM+  FFQK 
Sbjct: 250 SNPQNIAESLSEVKTLITDQINDFLTTPATEDEVRAALFLMHPEKAPGPDGMTALFFQKP 309

Query: 226 WSIVGKDVVDCIKDFWNTGQFSQGINETNIILIPKKKFPVKMEDLRPIALCNVVYKIASK 47
           W+ +  D++  +  F   G F + +N TNI LIPK + P +M +LRPI+LCNV YKI SK
Sbjct: 310 WATIKMDMLFLVNSFLQDGVFDKQLNTTNICLIPKTERPTRMTELRPISLCNVGYKIISK 369

Query: 46  VLANRLKNILHTVIS 2
           +L  RLK IL ++IS
Sbjct: 370 ILCQRLKKILPSLIS 384


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