BLASTX nr result

ID: Bupleurum21_contig00035423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00035423
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...   111   7e-23
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244...   108   3e-22
ref|XP_002885812.1| hypothetical protein ARALYDRAFT_319345 [Arab...   108   4e-22
dbj|BAD43070.1| hypothetical protein [Arabidopsis thaliana] gi|6...   105   3e-21

>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/104 (56%), Positives = 69/104 (66%)
 Frame = -1

Query: 314 QLDNCGRCMQDEILYTTLARSPNCLRLLTTLSLKGACQLSDIGXXXXXXXXXXXXXXXXS 135
           QLD CGRCM D ++  TLARS   L  L TLSL GAC+LSDIG                S
Sbjct: 431 QLDQCGRCMPDYVIPATLARSSRSLPALITLSLCGACRLSDIGLSLLVASATSLRSINLS 490

Query: 134 QCSLLTSAGISNIADSLGSVLRELYLDDCESIDPILMLPALSKL 3
           QCS LTS  I  +ADSLGSVLRELY+DDC+S+D +L+LP+L KL
Sbjct: 491 QCSHLTSTSIGTLADSLGSVLRELYIDDCQSLDAMLILPSLKKL 534


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/104 (55%), Positives = 68/104 (65%)
 Frame = -1

Query: 314 QLDNCGRCMQDEILYTTLARSPNCLRLLTTLSLKGACQLSDIGXXXXXXXXXXXXXXXXS 135
           QLD CGRCM D +L  T     N L  LTT+SLKGAC+LSD G                S
Sbjct: 521 QLDQCGRCMTDYVLRATFDMLSNGLPALTTVSLKGACRLSDAGLRALVSSAPMLRSINLS 580

Query: 134 QCSLLTSAGISNIADSLGSVLRELYLDDCESIDPILMLPALSKL 3
           QCSLLTSA I N+A++LGSVLRELY+DDC+ ID +L+L AL KL
Sbjct: 581 QCSLLTSASIKNLAETLGSVLRELYIDDCQGIDAMLILSALEKL 624


>ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244043 [Vitis vinifera]
          Length = 905

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/104 (55%), Positives = 68/104 (65%)
 Frame = -1

Query: 314 QLDNCGRCMQDEILYTTLARSPNCLRLLTTLSLKGACQLSDIGXXXXXXXXXXXXXXXXS 135
           QLD CGRCM D +L  T     N L  LTT+SLKGAC+LSD G                S
Sbjct: 594 QLDQCGRCMTDYVLRATFDMLSNGLPALTTVSLKGACRLSDAGLRALVSSAPMLRSINLS 653

Query: 134 QCSLLTSAGISNIADSLGSVLRELYLDDCESIDPILMLPALSKL 3
           QCSLLTSA I N+A++LGSVLRELY+DDC+ ID +L+L AL KL
Sbjct: 654 QCSLLTSASIKNLAETLGSVLRELYIDDCQGIDAMLILSALEKL 697


>ref|XP_002885812.1| hypothetical protein ARALYDRAFT_319345 [Arabidopsis lyrata subsp.
           lyrata] gi|297331652|gb|EFH62071.1| hypothetical protein
           ARALYDRAFT_319345 [Arabidopsis lyrata subsp. lyrata]
          Length = 773

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/103 (53%), Positives = 73/103 (70%)
 Frame = -1

Query: 314 QLDNCGRCMQDEILYTTLARSPNCLRLLTTLSLKGACQLSDIGXXXXXXXXXXXXXXXXS 135
           QLD CGRCM D +L++TLARSP  L +L++LSL GAC+LSD+G                S
Sbjct: 456 QLDQCGRCMPDYVLHSTLARSPKQLPMLSSLSLSGACRLSDVGLRALVSSAPAITSINLS 515

Query: 134 QCSLLTSAGISNIADSLGSVLRELYLDDCESIDPILMLPALSK 6
           QCSLLTS+ I  ++DSLGSVLRELY+++C++ID  L++ AL K
Sbjct: 516 QCSLLTSSSIDMLSDSLGSVLRELYINECQNIDMKLIVSALKK 558


>dbj|BAD43070.1| hypothetical protein [Arabidopsis thaliana]
           gi|62318624|dbj|BAD95072.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 762

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/103 (53%), Positives = 70/103 (67%)
 Frame = -1

Query: 314 QLDNCGRCMQDEILYTTLARSPNCLRLLTTLSLKGACQLSDIGXXXXXXXXXXXXXXXXS 135
           QLD CGRCM D IL  TLARSP  L +L+TLS+ GAC+LSD+G                +
Sbjct: 458 QLDQCGRCMPDYILPFTLARSPKVLPMLSTLSISGACRLSDVGLRQLVSSAPAITSINLN 517

Query: 134 QCSLLTSAGISNIADSLGSVLRELYLDDCESIDPILMLPALSK 6
           QCSLLTS+ I  ++DSLGSVLRELY+++C++ID   +L AL K
Sbjct: 518 QCSLLTSSSIDMLSDSLGSVLRELYINECQNIDMKHILAALKK 560


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