BLASTX nr result

ID: Bupleurum21_contig00034756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034756
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246...    99   8e-21
emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]    99   8e-21
emb|CBI37224.3| unnamed protein product [Vitis vinifera]               99   8e-21
ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2...    93   7e-19
ref|XP_002533623.1| conserved hypothetical protein [Ricinus comm...    92   6e-17

>ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera]
          Length = 1012

 Score = 99.0 bits (245), Expect(2) = 8e-21
 Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 6/96 (6%)
 Frame = +2

Query: 2   RNFLGRVRVSGSNIAREGEEIPQLFTLDKRSLFSHVRGEITLKIYVSTTEKVKHV----- 166
           RNFLG+VRVSG++IA+EGEE+ QL+TLDKRSLFSH+RGEI+LK Y+ST E VK V     
Sbjct: 89  RNFLGKVRVSGTSIAKEGEEVAQLYTLDKRSLFSHIRGEISLKFYLSTKEAVKEVTSGDA 148

Query: 167 -VNGGNEGFSKKNKKXXXXXXXXXXXGMAMAVPQQQ 271
            V+G +   SKKNKK           G AMA  QQQ
Sbjct: 149 AVSGSSSSSSKKNKK-------LQQQGPAMARQQQQ 177



 Score = 26.2 bits (56), Expect(2) = 8e-21
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 307 QTLQNPKSENQNLGDIKPVVIT 372
           QT Q+ K      GDIKPVVIT
Sbjct: 190 QTQQHAKPGGPKPGDIKPVVIT 211


>emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]
          Length = 1012

 Score = 99.0 bits (245), Expect(2) = 8e-21
 Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 6/96 (6%)
 Frame = +2

Query: 2   RNFLGRVRVSGSNIAREGEEIPQLFTLDKRSLFSHVRGEITLKIYVSTTEKVKHV----- 166
           RNFLG+VRVSG++IA+EGEE+ QL+TLDKRSLFSH+RGEI+LK Y+ST E VK V     
Sbjct: 89  RNFLGKVRVSGTSIAKEGEEVAQLYTLDKRSLFSHIRGEISLKFYLSTKEAVKEVTSGDA 148

Query: 167 -VNGGNEGFSKKNKKXXXXXXXXXXXGMAMAVPQQQ 271
            V+G +   SKKNKK           G AMA  QQQ
Sbjct: 149 AVSGSSSSSSKKNKK-------LQQQGPAMARQQQQ 177



 Score = 26.2 bits (56), Expect(2) = 8e-21
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 307 QTLQNPKSENQNLGDIKPVVIT 372
           QT Q+ K      GDIKPVVIT
Sbjct: 190 QTQQHAKPGGPKPGDIKPVVIT 211


>emb|CBI37224.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 99.0 bits (245), Expect(2) = 8e-21
 Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 6/96 (6%)
 Frame = +2

Query: 2   RNFLGRVRVSGSNIAREGEEIPQLFTLDKRSLFSHVRGEITLKIYVSTTEKVKHV----- 166
           RNFLG+VRVSG++IA+EGEE+ QL+TLDKRSLFSH+RGEI+LK Y+ST E VK V     
Sbjct: 89  RNFLGKVRVSGTSIAKEGEEVAQLYTLDKRSLFSHIRGEISLKFYLSTKEAVKEVTSGDA 148

Query: 167 -VNGGNEGFSKKNKKXXXXXXXXXXXGMAMAVPQQQ 271
            V+G +   SKKNKK           G AMA  QQQ
Sbjct: 149 AVSGSSSSSSKKNKK-------LQQQGPAMARQQQQ 177



 Score = 26.2 bits (56), Expect(2) = 8e-21
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 307 QTLQNPKSENQNLGDIKPVVIT 372
           QT Q+ K      GDIKPVVIT
Sbjct: 190 QTQQHAKPGGPKPGDIKPVVIT 211


>ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 93.2 bits (230), Expect(2) = 7e-19
 Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 10/79 (12%)
 Frame = +2

Query: 2   RNFLGRVRVSGSNIAREGEEIPQLFTLDKRSLFSHVRGEITLKIYVSTTEKVKHVVNGGN 181
           RNFLG+VRVSGS++A++GEE+ QL TLDKRSLFSH+RGEI+LK+YVST E+VK V   GN
Sbjct: 85  RNFLGKVRVSGSSVAKQGEEVVQLHTLDKRSLFSHIRGEISLKLYVSTREEVKEVGGFGN 144

Query: 182 ----------EGFSKKNKK 208
                        SKKNKK
Sbjct: 145 GEVVSSTPGSSNSSKKNKK 163



 Score = 25.4 bits (54), Expect(2) = 7e-19
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 280 SNKVSGQKIQTLQNPKSENQNLGDIKPVVIT 372
           +NK + ++ Q   N KS   N G IKPVV T
Sbjct: 185 NNKQAQEQGQNNINAKSVETNPGGIKPVVTT 215


>ref|XP_002533623.1| conserved hypothetical protein [Ricinus communis]
           gi|223526481|gb|EEF28752.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 892

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = +2

Query: 2   RNFLGRVRVSGSNIAREGEEIPQLFTLDKRSLFSHVRGEITLKIYVSTTEKVKHVVNGGN 181
           +NFLG+VR+SGS IA+EGEE+PQL TLDKRSLFSH+RGEITLK+YVS+ E+VK  V  GN
Sbjct: 89  KNFLGKVRISGSCIAKEGEEMPQLHTLDKRSLFSHIRGEITLKLYVSSREEVKENVGFGN 148


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