BLASTX nr result

ID: Bupleurum21_contig00034577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034577
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527245.1| lyase, putative [Ricinus communis] gi|223533...   140   8e-32
ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_003628880.1| Rhamnogalacturonate lyase [Medicago truncatu...   134   6e-30
ref|XP_002880453.1| hypothetical protein ARALYDRAFT_481121 [Arab...   134   8e-30
gb|AAS99719.1| At2g22620 [Arabidopsis thaliana] gi|51970438|dbj|...   133   1e-29

>ref|XP_002527245.1| lyase, putative [Ricinus communis] gi|223533421|gb|EEF35171.1|
           lyase, putative [Ricinus communis]
          Length = 621

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/100 (66%), Positives = 79/100 (79%)
 Frame = -1

Query: 304 FFAHVNRNIGNKTYVPTTWQILFDLEEVDQNGNYTMQLALASATTAELQVRINDENPTSP 125
           FFAHVNR IGNKTY  TTWQI+F L+ V Q GNYT+QLALASAT +E+ VR ND +   P
Sbjct: 494 FFAHVNREIGNKTYGATTWQIIFQLDSVKQGGNYTLQLALASATVSEILVRFNDPSSNRP 553

Query: 124 YFTTGLIGQDNAIARHGIHGLYRLYSVNVYGSLLQNGRNV 5
            FTTGLIG DNAIARHGIHGLY L+++NV    L++G+N+
Sbjct: 554 LFTTGLIGTDNAIARHGIHGLYWLFTINVPSDQLRDGKNI 593


>ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|222854486|gb|EEE92033.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/99 (64%), Positives = 80/99 (80%)
 Frame = -1

Query: 304 FFAHVNRNIGNKTYVPTTWQILFDLEEVDQNGNYTMQLALASATTAELQVRINDENPTSP 125
           FFAHV R+ GNKTY PTTWQI+F+LE V++N NYT++LALASAT +E+QVR N+ +   P
Sbjct: 547 FFAHVTRDAGNKTYDPTTWQIIFELENVNRNENYTLRLALASATASEIQVRFNNPSSDRP 606

Query: 124 YFTTGLIGQDNAIARHGIHGLYRLYSVNVYGSLLQNGRN 8
            FTTG +G+DNAIARHGIHGLY LY ++V GS L  G+N
Sbjct: 607 LFTTGAVGKDNAIARHGIHGLYWLYGIDVPGSQLVEGKN 645


>ref|XP_003628880.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355522902|gb|AET03356.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 688

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/100 (63%), Positives = 78/100 (78%)
 Frame = -1

Query: 304 FFAHVNRNIGNKTYVPTTWQILFDLEEVDQNGNYTMQLALASATTAELQVRINDENPTSP 125
           FFAHV R+ GNKTY PTTWQI+F+ +    +GNYT+QLALASA  + LQVR ND +   P
Sbjct: 561 FFAHVTRSTGNKTYEPTTWQIIFEHKNDIISGNYTLQLALASAADSNLQVRFNDRSKDPP 620

Query: 124 YFTTGLIGQDNAIARHGIHGLYRLYSVNVYGSLLQNGRNV 5
           +F TG IG+DNAIARHGIHGLYRL+S+NV  +LL  G+N+
Sbjct: 621 HFATGRIGRDNAIARHGIHGLYRLFSINVSSNLLVKGKNI 660


>ref|XP_002880453.1| hypothetical protein ARALYDRAFT_481121 [Arabidopsis lyrata subsp.
           lyrata] gi|297326292|gb|EFH56712.1| hypothetical protein
           ARALYDRAFT_481121 [Arabidopsis lyrata subsp. lyrata]
          Length = 681

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/99 (65%), Positives = 81/99 (81%)
 Frame = -1

Query: 304 FFAHVNRNIGNKTYVPTTWQILFDLEEVDQNGNYTMQLALASATTAELQVRINDENPTSP 125
           FFAHV RN GN TY PTTWQI+F+L+ V++ G YT++LALASA ++ELQ+RIND   +  
Sbjct: 555 FFAHVTRNFGNDTYQPTTWQIIFNLKNVNRIGLYTLRLALASAASSELQIRINDPK-SGH 613

Query: 124 YFTTGLIGQDNAIARHGIHGLYRLYSVNVYGSLLQNGRN 8
            FTTGLIG+DNAIARHGIHGLYRLYS+++ G+LL  G N
Sbjct: 614 IFTTGLIGKDNAIARHGIHGLYRLYSIDIAGNLLSVGDN 652


>gb|AAS99719.1| At2g22620 [Arabidopsis thaliana] gi|51970438|dbj|BAD43911.1|
           unknown protein [Arabidopsis thaliana]
          Length = 677

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/99 (64%), Positives = 80/99 (80%)
 Frame = -1

Query: 304 FFAHVNRNIGNKTYVPTTWQILFDLEEVDQNGNYTMQLALASATTAELQVRINDENPTSP 125
           FFAHV RN+GN TY PTTWQI+F+L+ V++ G YT+++ALASA  +ELQ+RIND   +  
Sbjct: 551 FFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIALASAADSELQIRINDPK-SDA 609

Query: 124 YFTTGLIGQDNAIARHGIHGLYRLYSVNVYGSLLQNGRN 8
            FTTG IG+DNAIARHGIHGLYRLYS++V G+LL  G N
Sbjct: 610 IFTTGFIGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDN 648


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