BLASTX nr result

ID: Bupleurum21_contig00034453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034453
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB52079.1| putative 9-cis epoxycarotenoid dioxygenase [Daucu...   144   7e-33
gb|ABB52080.1| putative 9-cis epoxycarotenoid dioxygenase [Daucu...   129   3e-28
gb|AFP57677.1| 9-cis-epoxycarotenoid dioxygenase 3 protein famil...    99   3e-19
ref|XP_002277354.1| PREDICTED: 9-cis-epoxycarotenoid dioxygenase...    97   1e-18
gb|AFP28804.1| 9-cis epoxy carotenoid dioxygenase 3 [Vitis vinif...    94   1e-17

>gb|ABB52079.1| putative 9-cis epoxycarotenoid dioxygenase [Daucus carota subsp.
           sativus]
          Length = 588

 Score =  144 bits (363), Expect = 7e-33
 Identities = 76/118 (64%), Positives = 89/118 (75%)
 Frame = -2

Query: 354 MASYATSTFVKPKITQTESSKPLFSQKPNTKNNVNCSVQTPSILHLPKHSPQKYQTPCVT 175
           MA+YAT  + KPKI  +   + + SQK   KNNVNCS+Q+PSILH PK SP  YQTPCV 
Sbjct: 1   MATYAT--WAKPKILTSCPQREVKSQKAYRKNNVNCSLQSPSILHFPKQSPHIYQTPCVP 58

Query: 174 TTIVPPKHVDXXXXXXSAAPQWNFIQKAASMALDAVENVIASRERGHPLPKTADPQVR 1
           TTI  PKH D      S++ QWNF+QKAASMALDAVENVIA+RE+ HPLPKTADPQV+
Sbjct: 59  TTIAQPKHQD-----SSSSNQWNFLQKAASMALDAVENVIAAREKEHPLPKTADPQVQ 111


>gb|ABB52080.1| putative 9-cis epoxycarotenoid dioxygenase [Daucus carota subsp.
           sativus]
          Length = 588

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
 Frame = -2

Query: 354 MASYATS--TFVKPKITQTESSKPLFSQKPNTKNNVNCSVQT-PSILHLPKHSPQKYQTP 184
           MA+ ATS  T+ KP I  ++   P        K NVNC++Q+ PSILH PK S QKYQTP
Sbjct: 1   MAASATSASTWAKPNIYSSQRDSP-------RKTNVNCAIQSSPSILHFPKQSKQKYQTP 53

Query: 183 CVTTTIVPPKHVDXXXXXXSAAPQWNFIQKAASMALDAVENVIASRERGHPLPKTADPQV 4
            + TTIV PKH D       A P+WNF+QKAASMALDAVEN+I S+E+ HPLPKTADPQV
Sbjct: 54  SIPTTIVQPKHQDSSSS---ATPKWNFLQKAASMALDAVENIIISQEQSHPLPKTADPQV 110

Query: 3   R 1
           +
Sbjct: 111 Q 111


>gb|AFP57677.1| 9-cis-epoxycarotenoid dioxygenase 3 protein family isoform 1
           [Nicotiana tabacum]
          Length = 613

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 58/130 (44%), Positives = 78/130 (60%), Gaps = 16/130 (12%)
 Frame = -2

Query: 342 ATSTFVKPKITQTES--------SKPLFSQKPNTK-NNVNCSVQTPSILHLPKHSPQKYQ 190
           A++T++KPK++   S        S  L  ++PN +  ++N S+Q P ILH PK SP  YQ
Sbjct: 7   ASNTWIKPKLSMPSSRDLAYSSNSISLVKKQPNRQLPSINSSLQAPPILHFPKQSPN-YQ 65

Query: 189 TPCVTT-------TIVPPKHVDXXXXXXSAAPQWNFIQKAASMALDAVENVIASRERGHP 31
           TP  TT       TI  PK         + +PQWN +QKAA+MALDAVE+V+   E  HP
Sbjct: 66  TPKTTTIPTSKPATISYPKQESTNSSSSTTSPQWNLVQKAAAMALDAVESVLTKHELEHP 125

Query: 30  LPKTADPQVR 1
           LPKTADP+V+
Sbjct: 126 LPKTADPRVQ 135


>ref|XP_002277354.1| PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic
           [Vitis vinifera]
          Length = 609

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
 Frame = -2

Query: 336 STFVKPKITQTESSKPLFSQ----------KPNTKNNVNCSVQTPSILHLPKHSPQKYQT 187
           S  VKPK+  + SS    S           +P  + N+NCS+ +PS+LH PKH+      
Sbjct: 15  SACVKPKLCYSSSSSSSSSSARDLGSFSFHRPTIRPNINCSLHSPSVLHFPKHTSSSTGV 74

Query: 186 PCVTTTIVPPKHVDXXXXXXSAAPQWNFIQKAASMALDAVENVIASRERGHPLPKTADPQ 7
             V TT+  PK  D        +PQWNF+Q AA+MALDAVE  + +RE  HPLPKTADP+
Sbjct: 75  ATVKTTL--PKEKDGFSSS--VSPQWNFLQSAAAMALDAVETALVARETQHPLPKTADPR 130

Query: 6   VR 1
           V+
Sbjct: 131 VQ 132


>gb|AFP28804.1| 9-cis epoxy carotenoid dioxygenase 3 [Vitis vinifera]
          Length = 610

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
 Frame = -2

Query: 336 STFVKPKITQTESSKPLFSQ-----------KPNTKNNVNCSVQTPSILHLPKHSPQKYQ 190
           S  VKPK+  + SS    S            +P  + N+NCS+ +PS+LH PKH+     
Sbjct: 15  SACVKPKLCYSSSSSSSSSSSALDLGSFSFHRPTIRPNINCSLHSPSVLHFPKHTSSSTG 74

Query: 189 TPCVTTTIVPPKHVDXXXXXXSAAPQWNFIQKAASMALDAVENVIASRERGHPLPKTADP 10
              V TT+  PK  D        + QWNF+Q AA+MALDAVE  + +RE  HPLPKTADP
Sbjct: 75  VATVKTTL--PKEKDDFSSS--VSQQWNFLQSAAAMALDAVETALVARETQHPLPKTADP 130

Query: 9   QVR 1
           +V+
Sbjct: 131 RVQ 133


Top