BLASTX nr result
ID: Bupleurum21_contig00034344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00034344
(738 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34941.3| unnamed protein product [Vitis vinifera] 77 3e-12
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu... 75 2e-11
ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain... 70 3e-10
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain... 67 4e-09
emb|CBI32139.3| unnamed protein product [Vitis vinifera] 66 7e-09
>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
Length = 1907
Score = 77.4 bits (189), Expect = 3e-12
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Frame = -2
Query: 737 NLASTMEVKDYWEFSVEERVFLFKLLSDEVLNSAMIRDHLTRCGSVSANL-KAIKAADTD 561
+LA+ ME K+YWE SV++R FLFK L DE+LN+A+IR HL +C SA L + +++ +
Sbjct: 1190 HLAAAMEEKEYWELSVDQRTFLFKFLCDELLNTALIRQHLEQCAESSAELQQKLRSISVE 1249
Query: 560 DQFLKEQHVDDQTPNSPKVSLHMNL------------TAIGSNGEQDRSSETISTDPAEI 417
+ LK + ++ +PKV M +A+ +NG+ + SE I + +
Sbjct: 1250 WKNLKLKE-ENLAARAPKVDSGMIYVAGEVGTEGGLSSALTNNGKLEGGSEGIRPNGLDK 1308
Query: 416 MSSVHA----------DVSESPHLETRSSPKHEIFTKKE-----FLGRDSSGRLYWAFGS 282
S + D E L T + + + E L S R+
Sbjct: 1309 HPSSNCSEGNCTLKPIDNEEMDGLGTEFNLQVNMCENMEKNDLQGLHHPSDIRIVHV-AE 1367
Query: 281 TDSSPHALVNESWEAQQNKVQDQRAATQS---NFSVKNPVLVVESPSSSRGVSVCNMYPA 111
DS +++ N+ + +QD A+ +S SV+ L + S ++G
Sbjct: 1368 HDSELNSIKNDI-----SDLQDSMASIESQLLKLSVRREFLDI---SKTQGT-------V 1412
Query: 110 EQTVQNTVSSSWTCYQSDSEVQELIRWLRDA--REREL 3
+ ++ S W YQS E+ LI WL+DA RE+EL
Sbjct: 1413 QPNASISICSQWVSYQSGEEIDALIGWLKDADPREKEL 1450
>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
gi|223535313|gb|EEF36988.1| DNA binding protein, putative
[Ricinus communis]
Length = 1794
Score = 74.7 bits (182), Expect = 2e-11
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = -2
Query: 737 NLASTMEVKDYWEFSVEERVFLFKLLSDEVLNSAMIRDHLTRCGSVSANLK 585
+L +TME+ DYW++SVEER+FL K L DEVLNSA IR+HL +C SVSA+L+
Sbjct: 997 HLGTTMEITDYWDYSVEERIFLLKFLGDEVLNSANIREHLDQCASVSADLQ 1047
Score = 73.6 bits (179), Expect = 4e-11
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = -2
Query: 338 KKEFLGRDSSGRLYWAFGSTDSSPHALVNESWEAQQNKVQDQRAATQSNFSVKNPVLVVE 159
+KEFLGRDS+GR+YWAF T S P +++ + QQ+ + ++ + N + +
Sbjct: 1198 RKEFLGRDSAGRVYWAFSRTGSLPWVVIDGTTVVQQSSIAEENRVLRFNNLTFRSSIGAQ 1257
Query: 158 SPSSSRGVSVCNMYPAEQTVQNTVSSSWTCYQSDSEVQELIRWLR--DAREREL 3
+G +V + Y ++ T +V W +QS +E++ELI+WLR D +REL
Sbjct: 1258 DLLRFKGSNVFSPYASDLTSGISVYFQWFSHQSYAEIEELIKWLRDNDPMQREL 1311
>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
vinifera]
Length = 2060
Score = 70.5 bits (171), Expect = 3e-10
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = -2
Query: 350 EIFTKKEFLGRDSSGRLYWAFGSTDSSPHALVNESWEA----QQNKVQDQRAATQSNFSV 183
++ +KEFLG+DS+GRLYW F +SP +++ S A + K + A S
Sbjct: 1446 KVSMRKEFLGKDSAGRLYWVFSRAGTSPWVVIDGSMMAGLRGGEAKEHEDTLANNSTLRG 1505
Query: 182 KNPVLVVESPSSSRGVSVCNMYPAEQTVQNTVSSSWTCYQSDSEVQELIRWLRD--ARER 9
P E SSR ++ N + +Q +S W QS+ E++ELI+WLRD RER
Sbjct: 1506 SFP-CGREKKFSSREFNISNRHMHDQEYSIPMSFPWVSCQSNDEIEELIQWLRDNEPRER 1564
Query: 8 EL 3
EL
Sbjct: 1565 EL 1566
Score = 66.2 bits (160), Expect = 7e-09
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = -2
Query: 737 NLASTMEVKDYWEFSVEERVFLFKLLSDEVLNSAMIRDHLTRCGSVSANLK 585
+LA+ ME+K+Y E S+EERVFL K +EVLNSA+IR+HL +C S+SA+L+
Sbjct: 1126 HLATIMEIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQCASLSADLQ 1176
>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
vinifera]
Length = 2164
Score = 67.0 bits (162), Expect = 4e-09
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = -2
Query: 737 NLASTMEVKDYWEFSVEERVFLFKLLSDEVLNSAMIRDHLTRCGSVSANL-KAIKAADTD 561
+LA+ ME K+YWE SV++R FLFK L DE+LN+A+IR HL +C SA L + +++ +
Sbjct: 1303 HLAAAMEEKEYWELSVDQRTFLFKFLCDELLNTALIRQHLEQCAESSAELQQKLRSISVE 1362
Query: 560 DQFLKEQHVDDQTPNSPKVSLHMNLTA--IGSNG 465
+ LK + ++ +PKV M A +G+ G
Sbjct: 1363 WKNLKLKE-ENLAARAPKVDSGMIYVAGEVGTEG 1395
Score = 61.2 bits (147), Expect = 2e-07
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Frame = -2
Query: 416 MSSVHADVSE-SPHLETRSSPKHEIFTKKEFLGRDSSGRLYWAFGSTDSSPHALVNESWE 240
++S+ D+S+ + + S ++ ++EFLG DS+GRLYW P LV+ S
Sbjct: 1554 LNSIKNDISDLQDSMASIESQLLKLSVRREFLGSDSAGRLYWILAKPGWHPWVLVDGSMA 1613
Query: 239 AQ-QNKVQDQRAATQSNFSVKNPVLVVESPSSSRGVSVCNMYPAEQTVQNTVSSSWTCYQ 63
Q + K++ + S+ + L ++ S+ G + + ++ S W YQ
Sbjct: 1614 LQKKEKMRYLKNPGDSSVQKNSTSLSMDILSTLGGSNASCPFLYRPNASISICSQWVSYQ 1673
Query: 62 SDSEVQELIRWLRDA--REREL 3
S E+ LI WL+DA RE+EL
Sbjct: 1674 SGEEIDALIGWLKDADPREKEL 1695
>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
Length = 1789
Score = 66.2 bits (160), Expect = 7e-09
Identities = 30/51 (58%), Positives = 42/51 (82%)
Frame = -2
Query: 737 NLASTMEVKDYWEFSVEERVFLFKLLSDEVLNSAMIRDHLTRCGSVSANLK 585
+LA+ ME+K+Y E S+EERVFL K +EVLNSA+IR+HL +C S+SA+L+
Sbjct: 1023 HLATIMEIKEYCELSIEERVFLLKFFCEEVLNSAIIREHLEQCASLSADLQ 1073
Score = 61.2 bits (147), Expect = 2e-07
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = -2
Query: 350 EIFTKKEFLGRDSSGRLYWAFGSTDSSPHALVNESWEAQQNKVQDQRAATQSNFSVKNPV 171
++ +KEFLG+DS+GRLYW F +SP +++
Sbjct: 1282 KVSMRKEFLGKDSAGRLYWVFSRAGTSPWVVIDG-------------------------- 1315
Query: 170 LVVESPSSSRGVSVCNMYPAEQTVQNTVSSSWTCYQSDSEVQELIRWLRD--AREREL 3
+ SSR ++ N + +Q +S W QS+ E++ELI+WLRD REREL
Sbjct: 1316 ---KKKFSSREFNISNRHMHDQEYSIPMSFPWVSCQSNDEIEELIQWLRDNEPREREL 1370