BLASTX nr result

ID: Bupleurum21_contig00034267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034267
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...   346   4e-93
ref|XP_002303179.1| chromatin remodeling complex subunit [Populu...   340   2e-91
ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794...   338   7e-91
ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795...   334   2e-89
ref|XP_002882790.1| photoperiod-independent early flowering 1 [A...   327   3e-87

>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score =  346 bits (887), Expect = 4e-93
 Identities = 172/278 (61%), Positives = 210/278 (75%)
 Frame = +1

Query: 1    QLRKVCNHPDLFEGRPIVSSFDMNAIETQLSSSVCSIFTPSPFSEVDLYGLGFVFTHLDF 180
            QLRKVCNHPDLFEGRPI+SSFDM  I+ QL+SSVCS+ +P PFS VDL GLG +FTHLDF
Sbjct: 771  QLRKVCNHPDLFEGRPIISSFDMIGIDFQLNSSVCSMLSPGPFSSVDLSGLGLLFTHLDF 830

Query: 181  CMNSWESDEVQAIATPSSLIEGRTSLGNVEEITFGSKHRKMQHGVNIFEEIQQXXXXXXX 360
             M SWE DE+ AIATPS LIE R ++ ++EEI   SK RK   G NIFEEI++       
Sbjct: 831  NMTSWECDEINAIATPSRLIEERANIDSIEEIGPQSKQRKRLPGTNIFEEIRKALFEERL 890

Query: 361  XXXXXXXIAISWWNSLRCKKKPIYSTSLRELVTIRNSVYNIHKTEGNMLSYLKSSMLANI 540
                    +I+WWNSLRC+KKPIYST+L+EL+TI+N V +I+  + + +SYL SS LA++
Sbjct: 891  REARERAASIAWWNSLRCRKKPIYSTNLQELLTIKNPVDDIYCQKVDRVSYLYSSKLADV 950

Query: 541  ILSPVERFHKMVNQVESFMFXXXXXXXXXXXCWCSKTRNSHIMQPGFKEICTELLSPLLT 720
            ILSPVERFH+M + VESFMF           CWCSKT +S  + P +KE C+ELL PLL+
Sbjct: 951  ILSPVERFHRMTDLVESFMFAIPAARAPVPTCWCSKTGSSVFLHPTYKEKCSELLLPLLS 1010

Query: 721  PFRPAIVRRQVYFPDRRLIQFDCGKLQELSILLRRLKS 834
            P RPAI+RRQVYFPDRRLIQFDCGKLQ+L++LLRRLKS
Sbjct: 1011 PIRPAIIRRQVYFPDRRLIQFDCGKLQKLAVLLRRLKS 1048


>ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840611|gb|EEE78158.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1682

 Score =  340 bits (872), Expect = 2e-91
 Identities = 165/278 (59%), Positives = 207/278 (74%)
 Frame = +1

Query: 1    QLRKVCNHPDLFEGRPIVSSFDMNAIETQLSSSVCSIFTPSPFSEVDLYGLGFVFTHLDF 180
            QLRKVCNHPDLFEGRPI+SSFDM  ++ QLSSS+CS+F+P P+S VDL  LG +FTHLDF
Sbjct: 410  QLRKVCNHPDLFEGRPIISSFDMAGVDIQLSSSICSMFSPGPYSSVDLCALGLIFTHLDF 469

Query: 181  CMNSWESDEVQAIATPSSLIEGRTSLGNVEEITFGSKHRKMQHGVNIFEEIQQXXXXXXX 360
             M SWE DEV+AIATPS LIE R +L N+E++  GSKH K   G NIFEEI++       
Sbjct: 470  NMVSWECDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEEIRKSLLEGRL 529

Query: 361  XXXXXXXIAISWWNSLRCKKKPIYSTSLRELVTIRNSVYNIHKTEGNMLSYLKSSMLANI 540
                    +I+WWNSLRC+KKPIYST+LREL+T+++ +Y+IH+ +   LS L SS L ++
Sbjct: 530  REMKQRAASIAWWNSLRCRKKPIYSTTLRELLTVKHPIYDIHRQKVERLSSLCSSKLGDV 589

Query: 541  ILSPVERFHKMVNQVESFMFXXXXXXXXXXXCWCSKTRNSHIMQPGFKEICTELLSPLLT 720
            +LSP+ERF KM + VESFMF            WCS+TR    +   ++E C+E+L PLL+
Sbjct: 590  VLSPIERFQKMTDLVESFMFAIPAARSTAPIFWCSQTRTPVFLHSTYEEKCSEMLLPLLS 649

Query: 721  PFRPAIVRRQVYFPDRRLIQFDCGKLQELSILLRRLKS 834
            P RPAIVRRQ+YFPDRRLIQFDCGKLQEL+ILLR+LKS
Sbjct: 650  PIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKS 687


>ref|XP_003518059.1| PREDICTED: uncharacterized protein LOC100794898 [Glycine max]
          Length = 2041

 Score =  338 bits (868), Expect = 7e-91
 Identities = 172/278 (61%), Positives = 203/278 (73%)
 Frame = +1

Query: 1    QLRKVCNHPDLFEGRPIVSSFDMNAIETQLSSSVCSIFTPSPFSEVDLYGLGFVFTHLDF 180
            QLRKVCNHPDLFEGRPIVSSFDM  I+ QLSSSVCS+  PSPFS VDL GLG +FTHLD+
Sbjct: 789  QLRKVCNHPDLFEGRPIVSSFDMRGIDIQLSSSVCSMLLPSPFSTVDLRGLGLLFTHLDY 848

Query: 181  CMNSWESDEVQAIATPSSLIEGRTSLGNVEEITFGSKHRKMQHGVNIFEEIQQXXXXXXX 360
             M +WESDEVQ I TP +LI  RT +  +E I      +K+Q G NIFEEIQ        
Sbjct: 849  SMAAWESDEVQTIETPVTLIMERTDMAELEVIRPHKCQKKLQ-GTNIFEEIQWAIWEERL 907

Query: 361  XXXXXXXIAISWWNSLRCKKKPIYSTSLRELVTIRNSVYNIHKTEGNMLSYLKSSMLANI 540
                    AI+WWNSLRCKK+PIYST+LR+LV +R+ V +IH+ + N +SYL SS LA+I
Sbjct: 908  KQTKEHAAAIAWWNSLRCKKRPIYSTTLRDLVALRHPVNDIHQVKANPVSYLYSSKLADI 967

Query: 541  ILSPVERFHKMVNQVESFMFXXXXXXXXXXXCWCSKTRNSHIMQPGFKEICTELLSPLLT 720
            +LSPVERF KM + VESFMF           CWCS +  S  + P +K+ C+E+L PLL+
Sbjct: 968  VLSPVERFQKMTDVVESFMFAIPAARAPSPVCWCSTSETSVFLHPSYKQKCSEVLLPLLS 1027

Query: 721  PFRPAIVRRQVYFPDRRLIQFDCGKLQELSILLRRLKS 834
            P RPAIVRRQVYFPDRRLIQFDCGKLQEL+ILLRRLKS
Sbjct: 1028 PIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKS 1065


>ref|XP_003535126.1| PREDICTED: uncharacterized protein LOC100795613 [Glycine max]
          Length = 2057

 Score =  334 bits (856), Expect = 2e-89
 Identities = 171/278 (61%), Positives = 205/278 (73%)
 Frame = +1

Query: 1    QLRKVCNHPDLFEGRPIVSSFDMNAIETQLSSSVCSIFTPSPFSEVDLYGLGFVFTHLDF 180
            QLRKVCNHPDLFEGRPIVSSFDM  I+ QLSSSVCSI  PSPFS VDL GLG +FTHLD 
Sbjct: 797  QLRKVCNHPDLFEGRPIVSSFDMCGIDIQLSSSVCSILLPSPFSTVDLRGLGLLFTHLD- 855

Query: 181  CMNSWESDEVQAIATPSSLIEGRTSLGNVEEITFGSKHRKMQHGVNIFEEIQQXXXXXXX 360
             M +WESDEVQ I TP++LI  RT +  +E I      +K+Q G NIFEEIQ+       
Sbjct: 856  SMAAWESDEVQTIETPATLIMERTDMTELEVIRPQKCQKKLQ-GTNIFEEIQRAIWEERL 914

Query: 361  XXXXXXXIAISWWNSLRCKKKPIYSTSLRELVTIRNSVYNIHKTEGNMLSYLKSSMLANI 540
                    AI+WWNSLRCK++PIYST+LR+LVT+R+ VY+IH+ + + +SYL SS LA+I
Sbjct: 915  KEAKERAAAIAWWNSLRCKRRPIYSTTLRDLVTLRHPVYDIHQVKADPVSYLYSSKLADI 974

Query: 541  ILSPVERFHKMVNQVESFMFXXXXXXXXXXXCWCSKTRNSHIMQPGFKEICTELLSPLLT 720
            +LSPVERF KM + VESFMF           CWCS +  +  + P +K+ C+E+L PLL 
Sbjct: 975  VLSPVERFQKMTDVVESFMFSIPAARAPSPVCWCSTSETNVFLHPSYKQKCSEVLLPLLA 1034

Query: 721  PFRPAIVRRQVYFPDRRLIQFDCGKLQELSILLRRLKS 834
            P RPAIVRRQVYFPDRRLIQFDCGKLQEL+ILLR+LKS
Sbjct: 1035 PIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRKLKS 1072


>ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp.
            lyrata] gi|297328630|gb|EFH59049.1|
            photoperiod-independent early flowering 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 2057

 Score =  327 bits (837), Expect = 3e-87
 Identities = 162/278 (58%), Positives = 203/278 (73%), Gaps = 1/278 (0%)
 Frame = +1

Query: 1    QLRKVCNHPDLFEGRPIVSSFDMNAIETQLSSSVCSIFTPSPFSEVDLYGLGFVFTHLDF 180
            QLRKVCNHPDLFEGRPIVSSFDM  I+ QLSS++CS+   SPFS+VDL  LGF+FTHLDF
Sbjct: 814  QLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEALGFLFTHLDF 873

Query: 181  CMNSWESDEVQAIATPSSLIEGRTSL-GNVEEITFGSKHRKMQHGVNIFEEIQQXXXXXX 357
             M SWE DE++AI+TPS LI+ R +L  ++E I    K+RK   G NIFEEI++      
Sbjct: 874  SMTSWEGDEIKAISTPSELIKQRVNLKDDMEAIPLSLKNRKNLQGTNIFEEIRKAVFEER 933

Query: 358  XXXXXXXXIAISWWNSLRCKKKPIYSTSLRELVTIRNSVYNIHKTEGNMLSYLKSSMLAN 537
                     AI+WWNSLRC++KP YSTSLR L+TI+  + +IH  + N  SY+ SS+LA+
Sbjct: 934  VKETKDRAAAIAWWNSLRCQRKPTYSTSLRTLLTIKGPLDDIHHLKANCSSYMYSSILAD 993

Query: 538  IILSPVERFHKMVNQVESFMFXXXXXXXXXXXCWCSKTRNSHIMQPGFKEICTELLSPLL 717
            I+LSP+ERF +M+  VE+F F           CWCSK+ +   + P +KE  T+LLSPLL
Sbjct: 994  IVLSPIERFQQMIELVEAFTFVIPAARVPSPACWCSKSDSPVFLSPSYKEKVTDLLSPLL 1053

Query: 718  TPFRPAIVRRQVYFPDRRLIQFDCGKLQELSILLRRLK 831
            +P RPAIVRRQVYFPDRRLIQFDCGKLQEL++LLR+LK
Sbjct: 1054 SPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLLRKLK 1091


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