BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034078
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containi...   226   4e-57
ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containi...   196   4e-48
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ...   193   2e-47
ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containi...   192   6e-47
ref|XP_002523877.1| pentatricopeptide repeat-containing protein,...   192   6e-47

>ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 313

 Score =  226 bits (575), Expect = 4e-57
 Identities = 111/178 (62%), Positives = 132/178 (74%)
 Frame = +1

Query: 25  NGFASDLGNLNGLVTMYGKCGDLASARKVFDEMPYRNLVSWSAMMGGYGIHDGFDEVFVL 204
           NG ASDL  +N L++MY KCGDLA+ARKVFD M  RNLV+WSAMM GYG+H  F EVF L
Sbjct: 137 NGLASDLATINALISMYSKCGDLAAARKVFDRMTERNLVTWSAMMAGYGVHGVFGEVFEL 196

Query: 205 FERMVECGLVPDGVTFTSVLSACSHGGFTDKGMEYFEMMKERFGLRPGLEHYTCVVDMLG 384
           F+ MV+ G VPDGVTFT+VL+ACSHGGF + G +YF MM+ERFG+RP LEHYTC+VDMLG
Sbjct: 197 FDGMVDAGEVPDGVTFTAVLAACSHGGFMENGRKYFGMMEERFGVRPRLEHYTCMVDMLG 256

Query: 385 RAGRFXXXXXXXXXXXXXXXXXXLLNALRASCKIHGRIDVAERICEKIYGRRLIASSL 558
           RAGR                   L  AL ASCKIHG+++VAER+ EK+YGRRL  +SL
Sbjct: 257 RAGR-VEEAEELIEGMEVEPDEALWGALLASCKIHGKVEVAERVAEKVYGRRLNEASL 313


>ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449515851|ref|XP_004164961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 308

 Score =  196 bits (497), Expect = 4e-48
 Identities = 95/164 (57%), Positives = 119/164 (72%)
 Frame = +1

Query: 25  NGFASDLGNLNGLVTMYGKCGDLASARKVFDEMPYRNLVSWSAMMGGYGIHDGFDEVFVL 204
           NGF++DL +LN L+TMYGKCGDL  ARKVFD MP RN VSWSA+M GYG+H  F EVF L
Sbjct: 138 NGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFRL 197

Query: 205 FERMVECGLVPDGVTFTSVLSACSHGGFTDKGMEYFEMMKERFGLRPGLEHYTCVVDMLG 384
           FERMVE G  PD +TFTS+L+ACSHGG  +KG EYF MM+  F LRPGL+HYTC+VD+LG
Sbjct: 198 FERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCMVDLLG 257

Query: 385 RAGRFXXXXXXXXXXXXXXXXXXLLNALRASCKIHGRIDVAERI 516
           R+G+                   L  A+ ++C+IHG++DVA+R+
Sbjct: 258 RSGQ-VEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300


>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485919|gb|AES67122.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score =  193 bits (491), Expect = 2e-47
 Identities = 99/180 (55%), Positives = 119/180 (66%), Gaps = 2/180 (1%)
 Frame = +1

Query: 25  NGFASDLGNLNGLVTMYGKCGDLASARKVFDEMPYRNLVSWSAMMGGYGIHDGFDEVFVL 204
           NGFA DL N N L+ MY KCG+L  ARKVFD M  RN V+WS MM GYG+H  F+EVF +
Sbjct: 138 NGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMAGYGMHGRFEEVFEM 197

Query: 205 FERMVECGLVPDGVTFTSVLSACSHGGFTDKGMEYFEMMKERFGLRPGLEHYTCVVDMLG 384
           F RMVE G   D V+FT VL+ACSHGGF +KG E FEMMK RFG++P + HYTC+VDMLG
Sbjct: 198 FNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYTCMVDMLG 257

Query: 385 RAGRFXXXXXXXXXXXXXXXXXXLLNALRASCKIHGRIDVAERICEKIYGRRL--IASSL 558
           R G                    L+ AL  +CK HGR+DVAER+ E+ YG  L  +ASS+
Sbjct: 258 RVG-LVEEAEKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAERFYGTELSVVASSI 316


>ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 315

 Score =  192 bits (487), Expect = 6e-47
 Identities = 95/177 (53%), Positives = 118/177 (66%)
 Frame = +1

Query: 25  NGFASDLGNLNGLVTMYGKCGDLASARKVFDEMPYRNLVSWSAMMGGYGIHDGFDEVFVL 204
           NGF  DL N N L+ MY KCG L  ARK+FD M  RN +++S MM GYG+H    EVF L
Sbjct: 138 NGFGLDLANSNALINMYSKCGHLVYARKLFDRMWQRNEITFSTMMAGYGMHGKCGEVFEL 197

Query: 205 FERMVECGLVPDGVTFTSVLSACSHGGFTDKGMEYFEMMKERFGLRPGLEHYTCVVDMLG 384
           F++MVE G  PDGVTFT+VLSACSHGGF DKG EY +MM+ RFG++PGL HYTC+VDMLG
Sbjct: 198 FDKMVEAGERPDGVTFTAVLSACSHGGFIDKGREYLKMMEVRFGVKPGLHHYTCMVDMLG 257

Query: 385 RAGRFXXXXXXXXXXXXXXXXXXLLNALRASCKIHGRIDVAERICEKIYGRRLIASS 555
           R G+                   L  AL  +CK HG+++V ER+ E++YGR L  +S
Sbjct: 258 RVGQ-VEEAEKLILRMEVKPDEALWGALLGACKTHGKLEVTERVEERVYGRELSFAS 313


>ref|XP_002523877.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536965|gb|EEF38603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 302

 Score =  192 bits (487), Expect = 6e-47
 Identities = 97/169 (57%), Positives = 112/169 (66%)
 Frame = +1

Query: 25  NGFASDLGNLNGLVTMYGKCGDLASARKVFDEMPYRNLVSWSAMMGGYGIHDGFDEVFVL 204
           NG A DL N N L+ MY KCG+LA ARKVFD MP RN VSW+ MM GYG+H    EV VL
Sbjct: 134 NGLAFDLANSNALINMYAKCGNLAGARKVFDRMPARNEVSWATMMAGYGMHGKGGEVLVL 193

Query: 205 FERMVECGLVPDGVTFTSVLSACSHGGFTDKGMEYFEMMKERFGLRPGLEHYTCVVDMLG 384
           F RMVE G   D V  T+VLSACSHGG  +KG EYF MM+ERFG++P LEHYTC+VDMLG
Sbjct: 194 FNRMVEEGSSVDAVCLTAVLSACSHGGMVEKGAEYFGMMEERFGVKPSLEHYTCMVDMLG 253

Query: 385 RAGRFXXXXXXXXXXXXXXXXXXLLNALRASCKIHGRIDVAERICEKIY 531
           RAGR                   L  AL  SCKIHG++DVAER+   ++
Sbjct: 254 RAGR-VEEAEELVMRMEIKPDEVLWAALLGSCKIHGKVDVAERVSRNVF 301