BLASTX nr result

ID: Bupleurum21_contig00033982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033982
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272671.1| PREDICTED: U-box domain-containing protein 3...   215   5e-54
ref|XP_002300058.1| predicted protein [Populus trichocarpa] gi|2...   208   6e-52
ref|XP_002521473.1| ubiquitin-protein ligase, putative [Ricinus ...   206   3e-51
ref|XP_003525677.1| PREDICTED: U-box domain-containing protein 7...   195   4e-48
ref|XP_003547712.1| PREDICTED: U-box domain-containing protein 4...   194   9e-48

>ref|XP_002272671.1| PREDICTED: U-box domain-containing protein 3 [Vitis vinifera]
           gi|296087602|emb|CBI34858.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  215 bits (547), Expect = 5e-54
 Identities = 118/198 (59%), Positives = 146/198 (73%), Gaps = 9/198 (4%)
 Frame = -1

Query: 570 AKSGAIPVVINLLQCQSETLVDLAVAALMILSSCTANKLAIAGCGAIEMLLEIISVENT- 394
           AK+GAIPV+++LLQCQSE L+DLA+AAL+ILSSC ANKL IA  GAI++L+E++S +NT 
Sbjct: 78  AKAGAIPVLLSLLQCQSEVLMDLAMAALLILSSCRANKLVIAASGAIQILVEMLSGDNTG 137

Query: 393 --------SIQAKLDIIVTLHNLSTSSQIIPPIALTSIVVTXXXXXXXXXXXXXXXXKAI 238
                   S+QAKLD I T  NLST  +IIP +  +  V +                K I
Sbjct: 138 GDNNGSSMSMQAKLDAISTFQNLSTCHEIIPLVVSSGAVFSLLQLLCGCDKSSELVQKVI 197

Query: 237 ALLEQIVSSSQIALRQTAGTSGAIQALVETVEDGSMQCKEHAVGILLLICQSCRDKYRGL 58
           +LLE + S S+IA+ + AGT GAIQALVETVE+GS QC+EHAVGILLLIC+SCR+KYRGL
Sbjct: 198 SLLETMASWSEIAVEEVAGTGGAIQALVETVEEGSPQCQEHAVGILLLICKSCREKYRGL 257

Query: 57  ILREGVMPGLLQLSVDGT 4
           ILREG+MPGLLQLSV GT
Sbjct: 258 ILREGIMPGLLQLSVHGT 275


>ref|XP_002300058.1| predicted protein [Populus trichocarpa] gi|222847316|gb|EEE84863.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  208 bits (529), Expect = 6e-52
 Identities = 113/193 (58%), Positives = 141/193 (73%), Gaps = 5/193 (2%)
 Frame = -1

Query: 567 KSGAIPVVINLLQCQSETLVDLAVAALMILSSCTANKLAIAGCGAIEMLLEIISVE---- 400
           K G IPV++ LLQ Q+E+L +L +AA +++SSC ANKLAIA  GAI +L++I+  E    
Sbjct: 79  KLGVIPVLLELLQSQNESLTELILAAFLVISSCGANKLAIAASGAISVLVKILGGEYDDT 138

Query: 399 -NTSIQAKLDIIVTLHNLSTSSQIIPPIALTSIVVTXXXXXXXXXXXXXXXXKAIALLEQ 223
            + S+QAKLD + TLHNLS+  QIIP I  + IV T                KA+ALLE 
Sbjct: 139 DSISMQAKLDAVATLHNLSSCHQIIPSIVSSGIVFTLLQLIHSYEKSSELVDKAMALLED 198

Query: 222 IVSSSQIALRQTAGTSGAIQALVETVEDGSMQCKEHAVGILLLICQSCRDKYRGLILREG 43
           I++SS+ AL QT+G   AI+A VET+E+G+ QCKEHAVGILLLICQSCRDKYRGLILREG
Sbjct: 199 IIASSENALAQTSGAGDAIRAFVETIEEGTPQCKEHAVGILLLICQSCRDKYRGLILREG 258

Query: 42  VMPGLLQLSVDGT 4
           V+PGLLQLSVDGT
Sbjct: 259 VIPGLLQLSVDGT 271


>ref|XP_002521473.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223539372|gb|EEF40963.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 339

 Score =  206 bits (523), Expect = 3e-51
 Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 9/197 (4%)
 Frame = -1

Query: 567 KSGAIPVVINLLQCQSETLVDLAVAALMILSSCTANKLAIAGCGAIEMLLEIISVENT-- 394
           KSG +PV++ LL C +ETL++L +AAL+ILSSC  NKLAI   GAI +++ +++ +    
Sbjct: 79  KSGVVPVLLELLDCPNETLLELVIAALLILSSCAPNKLAITSLGAIPLIIGVLNQDYADD 138

Query: 393 -------SIQAKLDIIVTLHNLSTSSQIIPPIALTSIVVTXXXXXXXXXXXXXXXXKAIA 235
                  S+QAKLD I TLHNLST  QIIP I  +  V                  KA+A
Sbjct: 139 DAATSCISMQAKLDAIATLHNLSTCQQIIPSIVSSGTVFILLQIIHSYEKSSQLVEKAMA 198

Query: 234 LLEQIVSSSQIALRQTAGTSGAIQALVETVEDGSMQCKEHAVGILLLICQSCRDKYRGLI 55
           LLE I++ S+ AL QTA T GAI+ALVE +E+GS QCKEHAV ILLLICQSCRDKYRGLI
Sbjct: 199 LLENIITLSETALLQTATTGGAIRALVENIEEGSPQCKEHAVVILLLICQSCRDKYRGLI 258

Query: 54  LREGVMPGLLQLSVDGT 4
           LREGVMPGLLQLSVDGT
Sbjct: 259 LREGVMPGLLQLSVDGT 275


>ref|XP_003525677.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 329

 Score =  195 bits (496), Expect = 4e-48
 Identities = 107/189 (56%), Positives = 136/189 (71%), Gaps = 1/189 (0%)
 Frame = -1

Query: 567 KSGAIPVVINLLQCQSET-LVDLAVAALMILSSCTANKLAIAGCGAIEMLLEIISVENTS 391
           KSGA+PV+++LL C S+T ++ L +AA++ LSSC ANK+AIA  GAI++L E ++  N S
Sbjct: 79  KSGALPVLVSLLYCHSQTVIIQLTLAAMLTLSSCKANKVAIASSGAIQLLAEFVN-SNCS 137

Query: 390 IQAKLDIIVTLHNLSTSSQIIPPIALTSIVVTXXXXXXXXXXXXXXXXKAIALLEQIVSS 211
            Q++LD I TLHNL+T  +I+P I  + ++ +                KAI LLE IVSS
Sbjct: 138 TQSQLDAIATLHNLTTCKEIMPLIVSSGVMFSLLELIHSTVKSSPLVEKAIELLENIVSS 197

Query: 210 SQIALRQTAGTSGAIQALVETVEDGSMQCKEHAVGILLLICQSCRDKYRGLILREGVMPG 31
           S+ AL + AG  GAI  LVET+EDGS+  KEHAV ILLLICQSCR+KYRGLIL EGVMPG
Sbjct: 198 SESALCKAAGAGGAIGILVETIEDGSLLSKEHAVSILLLICQSCREKYRGLILTEGVMPG 257

Query: 30  LLQLSVDGT 4
           LLQLSVDGT
Sbjct: 258 LLQLSVDGT 266


>ref|XP_003547712.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 332

 Score =  194 bits (493), Expect = 9e-48
 Identities = 99/189 (52%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = -1

Query: 567 KSGAIPVVINLLQCQSETLVDLAVAALMILSSCTANKLAIAGCGAIEMLLEIISVENTSI 388
           KSGA+PV+++L  CQS+T+ +L +A L+ +SSC +NK+AIA  GAI++L + ++  ++S 
Sbjct: 79  KSGALPVLLSLFHCQSQTVAELTIATLLTISSCNSNKVAIASSGAIQLLAQFLNSTSSST 138

Query: 387 QAKLDIIVTLHNLSTSSQIIPPIALTS-IVVTXXXXXXXXXXXXXXXXKAIALLEQIVSS 211
           Q +LD + TLHNLST  +II P  ++S ++++                KAI LLE IV+S
Sbjct: 139 QFQLDTLATLHNLSTCQEIITPFVVSSGVIISLLELIHTSEKSSTLVEKAIGLLEHIVTS 198

Query: 210 SQIALRQTAGTSGAIQALVETVEDGSMQCKEHAVGILLLICQSCRDKYRGLILREGVMPG 31
           S+ AL + A   GA++ LVET+EDGS+Q KEHAVG LLL CQS R+K+RG+ILREGVMPG
Sbjct: 199 SKSALCEAASIGGAVRTLVETIEDGSLQSKEHAVGTLLLFCQSSREKFRGMILREGVMPG 258

Query: 30  LLQLSVDGT 4
           LLQLSVDGT
Sbjct: 259 LLQLSVDGT 267


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