BLASTX nr result

ID: Bupleurum21_contig00033957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033957
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...   273   3e-71
emb|CBI19025.3| unnamed protein product [Vitis vinifera]              273   3e-71
gb|ACD56617.1| hypothetical binding protein [Gossypioides kirkii]     246   5e-63
ref|XP_002513802.1| androgen induced inhibitor of proliferation ...   236   4e-60
ref|XP_002302238.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54

>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
           [Vitis vinifera]
          Length = 1305

 Score =  273 bits (698), Expect = 3e-71
 Identities = 143/240 (59%), Positives = 182/240 (75%), Gaps = 1/240 (0%)
 Frame = -1

Query: 719 AKSLIADVAEKLASKKSCPNKDFLIKLLRQAVGTLPELNQSPVLSAVVKPLIDSLVKHSL 540
           A  L+A++  +L  ++S P KDFLIK LRQA   L EL Q   L   +KPL  S VKH L
Sbjct: 5   AAKLVAEIGGRL-HQQSRPTKDFLIKSLRQAASALLELEQKSSLEPAIKPLSGSFVKHGL 63

Query: 539 LRHKDRDVKLLVAICFSEFIRISAPDHDFSDEMLRDIFKLFISMFSELADTSSPYFSRRV 360
           L +KD+DVKLLVAIC SE IR+ AP+  F D+ LR+IF+LF+SMF+ELA+T+SPYFSRRV
Sbjct: 64  LHNKDKDVKLLVAICCSEIIRVMAPEPPFDDKELREIFELFVSMFAELANTTSPYFSRRV 123

Query: 359 KLLETVAKLEFCVLMIDNGSDDLILEMFSVFFDVVREQHPHSVMNAMSSIMALILKEKIS 180
           K+LET AK  FC+LM+D   D L+LEMF+ FF V RE H  SV+ A+ SIM LILKEK+S
Sbjct: 124 KILETFAKYNFCMLMLDINCDILVLEMFNTFFSVAREHHQQSVVKAILSIMTLILKEKVS 183

Query: 179 ESLLVVTLQNLLNESKAASPA-SKLAVAVIQDCSVELEPSVCGFLTSCILDKNAVGSELR 3
           + LL V LQNLL E K A+ + S++AV+V+Q+C+ ELEP VCGFLTSCILD++AVG+EL+
Sbjct: 184 QPLLDVILQNLLKEGKGATASPSRIAVSVVQNCAEELEPFVCGFLTSCILDRDAVGNELK 243


>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  273 bits (698), Expect = 3e-71
 Identities = 143/240 (59%), Positives = 182/240 (75%), Gaps = 1/240 (0%)
 Frame = -1

Query: 719 AKSLIADVAEKLASKKSCPNKDFLIKLLRQAVGTLPELNQSPVLSAVVKPLIDSLVKHSL 540
           A  L+A++  +L  ++S P KDFLIK LRQA   L EL Q   L   +KPL  S VKH L
Sbjct: 5   AAKLVAEIGGRL-HQQSRPTKDFLIKSLRQAASALLELEQKSSLEPAIKPLSGSFVKHGL 63

Query: 539 LRHKDRDVKLLVAICFSEFIRISAPDHDFSDEMLRDIFKLFISMFSELADTSSPYFSRRV 360
           L +KD+DVKLLVAIC SE IR+ AP+  F D+ LR+IF+LF+SMF+ELA+T+SPYFSRRV
Sbjct: 64  LHNKDKDVKLLVAICCSEIIRVMAPEPPFDDKELREIFELFVSMFAELANTTSPYFSRRV 123

Query: 359 KLLETVAKLEFCVLMIDNGSDDLILEMFSVFFDVVREQHPHSVMNAMSSIMALILKEKIS 180
           K+LET AK  FC+LM+D   D L+LEMF+ FF V RE H  SV+ A+ SIM LILKEK+S
Sbjct: 124 KILETFAKYNFCMLMLDINCDILVLEMFNTFFSVAREHHQQSVVKAILSIMTLILKEKVS 183

Query: 179 ESLLVVTLQNLLNESKAASPA-SKLAVAVIQDCSVELEPSVCGFLTSCILDKNAVGSELR 3
           + LL V LQNLL E K A+ + S++AV+V+Q+C+ ELEP VCGFLTSCILD++AVG+EL+
Sbjct: 184 QPLLDVILQNLLKEGKGATASPSRIAVSVVQNCAEELEPFVCGFLTSCILDRDAVGNELK 243


>gb|ACD56617.1| hypothetical binding protein [Gossypioides kirkii]
          Length = 866

 Score =  246 bits (627), Expect = 5e-63
 Identities = 135/254 (53%), Positives = 177/254 (69%), Gaps = 13/254 (5%)
 Frame = -1

Query: 725 EAAKSLIADVAEKLASKKSCPNKDFLIKLLRQAVGTLPELNQSPV------------LSA 582
           E+   LI+ +  KL  + + PNKD L+K LRQ V  L ++ Q  V            L+A
Sbjct: 3   ESTLQLISGIGTKLC-QLARPNKDVLVKSLRQVVSALSQIEQPSVVEVAAKARVLQKLAA 61

Query: 581 VVKPLIDSLVKHSLLRHKDRDVKLLVAICFSEFIRISAPDHDFSDEMLRDIFKLFISMFS 402
             KPL +S+VKH L  H D+DV+LL AIC SEF RI AP   F+D+ LRDIFKL IS+FS
Sbjct: 62  ATKPLRNSVVKHGLSNHTDKDVRLLAAICISEFFRILAPQPPFADKHLRDIFKLIISIFS 121

Query: 401 ELADTSSPYFSRRVKLLETVAKLEFCVLMIDNGSDDLILEMFSVFFDVVREQHPHSVMNA 222
           ELADT+S +FSRRVK+LETVA+ + CV+M+D G +DLILEMF  FF VVR+ H  S++N 
Sbjct: 122 ELADTTSAFFSRRVKILETVARCKCCVIMLDIGCNDLILEMFKTFFSVVRDHHQQSLIND 181

Query: 221 MSSIMALILKEKISESLLVVTLQNLLNESK-AASPASKLAVAVIQDCSVELEPSVCGFLT 45
           + SIM  IL E++S  L+ V L NL+ ESK A S AS+LA +VI+ C+ +L+P VCGFLT
Sbjct: 182 VLSIMTHILNEEVSHQLMDVILGNLIQESKDATSAASQLAASVIRSCAEKLQPFVCGFLT 241

Query: 44  SCILDKNAVGSELR 3
           SC LD+++VGSEL+
Sbjct: 242 SCSLDRDSVGSELK 255


>ref|XP_002513802.1| androgen induced inhibitor of proliferation (as3) / pds5, putative
           [Ricinus communis] gi|223546888|gb|EEF48385.1| androgen
           induced inhibitor of proliferation (as3) / pds5,
           putative [Ricinus communis]
          Length = 1332

 Score =  236 bits (602), Expect = 4e-60
 Identities = 130/254 (51%), Positives = 179/254 (70%), Gaps = 13/254 (5%)
 Frame = -1

Query: 725 EAAKSLIADVAEKLASKKSCPNKDFLIKLLRQAVGTLPELNQ-SPV-----------LSA 582
           E++  L++++  +L  + + PNKDFL+K LRQA   L ++   SP            L++
Sbjct: 3   ESSLQLVSEIGIQLG-RLARPNKDFLVKSLRQAANALAQIEPPSPPEASRKKEAVNKLAS 61

Query: 581 VVKPLIDSLVKHSLLRHKDRDVKLLVAICFSEFIRISAPDHDFSDEMLRDIFKLFISMFS 402
            +KPL  S VKH LLR+ D+DVKLLVAIC SE  RI AP+  F D+ LRD+FKL +SMF+
Sbjct: 62  GIKPLGKSFVKHGLLRNSDKDVKLLVAICISEIFRILAPEPPFEDKYLRDVFKLILSMFA 121

Query: 401 ELADTSSPYFSRRVKLLETVAKLEFCVLMIDNGSDDLILEMFSVFFDVVREQHPHSVMNA 222
           ELADT+SPYFSRRVK+LETVA+ +  V+++D   +DL+LEMF++FF +VRE H  S++N 
Sbjct: 122 ELADTTSPYFSRRVKILETVARCKCFVILLDIDCNDLVLEMFNIFFSIVRENHQRSLIND 181

Query: 221 MSSIMALILKEKISESLLVVTLQNLLNESKAAS-PASKLAVAVIQDCSVELEPSVCGFLT 45
           + SIM  IL E+ S  L  V L+NL+ E  AAS  AS+LA +VIQ C+ +LEP +CGFLT
Sbjct: 182 VLSIMTHILNEEASLPLSDVILRNLVKEGTAASAAASQLAASVIQSCAEKLEPFICGFLT 241

Query: 44  SCILDKNAVGSELR 3
           SC LD++A+ SEL+
Sbjct: 242 SCSLDRDAIDSELK 255


>ref|XP_002302238.1| predicted protein [Populus trichocarpa] gi|222843964|gb|EEE81511.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  217 bits (553), Expect = 2e-54
 Identities = 120/252 (47%), Positives = 168/252 (66%), Gaps = 11/252 (4%)
 Frame = -1

Query: 725 EAAKSLIADVAEKLASKKSCPNKDFLIKLLRQAVGTLPELNQ----------SPVLSAVV 576
           E+   L++++ + L  + + PNKDFL+K LRQA   L ++ Q          +  L A +
Sbjct: 3   ESPLQLVSEIGDHLG-RHARPNKDFLVKSLRQAANALSQIEQPLETFKKAEATKKLEAAI 61

Query: 575 KPLIDSLVKHSLLRHKDRDVKLLVAICFSEFIRISAPDHDFSDEMLRDIFKLFISMFSEL 396
           KPL  S++KH L++H D++VKLLVAIC SE  R+ AP+  F D+ LR           EL
Sbjct: 62  KPLRKSILKHYLIKHTDKEVKLLVAICVSEVFRVLAPEPPFEDKYLR-----------EL 110

Query: 395 ADTSSPYFSRRVKLLETVAKLEFCVLMIDNGSDDLILEMFSVFFDVVREQHPHSVMNAMS 216
           +DT+SP+F RRVK+LETVA+ + CV+M+D    DL+LEMF +FF  VRE H  S+++ + 
Sbjct: 111 SDTASPHFLRRVKVLETVARCKCCVIMLDVDCHDLVLEMFKIFFSSVREHHQQSLIDEIL 170

Query: 215 SIMALILKEKISESLLVVTLQNLLNESKAASP-ASKLAVAVIQDCSVELEPSVCGFLTSC 39
           SIM  +L E+ S++LL V L NL+ E KAA+P AS+LA +VIQ C  +LEP VCGFLTSC
Sbjct: 171 SIMKHVLNEEASQALLDVILLNLIKEGKAATPAASQLAASVIQTCEEKLEPFVCGFLTSC 230

Query: 38  ILDKNAVGSELR 3
            LD++AV SEL+
Sbjct: 231 FLDRDAVESELK 242


Top