BLASTX nr result

ID: Bupleurum21_contig00033943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033943
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268568.1| PREDICTED: uncharacterized protein LOC100241...    86   3e-15
ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002513547.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_003588527.1| Zinc finger protein CONSTANS-like protein [M...    79   5e-13

>ref|XP_002268568.1| PREDICTED: uncharacterized protein LOC100241849 [Vitis vinifera]
           gi|302144033|emb|CBI23138.3| unnamed protein product
           [Vitis vinifera]
          Length = 292

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/92 (51%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   LSEVFCEFKKDLLANEATGTSLSEVLQIQIPVVT-DKNLTIEEKVLPQINMPKSASSDCL 179
           LSEVF E KKDLLA     + LSEVL I+IPV    +    EEK L +    KS SS CL
Sbjct: 114 LSEVFYECKKDLLAKTVIESPLSEVLDIKIPVARMGETQAAEEKALYEGLFQKSVSSGCL 173

Query: 180 DPTGWIHRNPVRDNYLEYPGMDFGAIYGMRRS 275
               W++   +R N+L++PGMDFGA YGMRR+
Sbjct: 174 SSMEWVNGTAMRPNFLDFPGMDFGAAYGMRRA 205


>ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|222868411|gb|EEF05542.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   LSEVFCEFKKDLLANEATGT-SLSEVLQIQIPVV-TDKNLTIEEKVLPQINMPKSASSDC 176
           L+EVF E KKD+L  EA  T SL+E+L I+IP+V TD+N   E K+LP   + KS SS C
Sbjct: 136 LNEVFYECKKDILEKEAMETPSLAELLDIKIPIVRTDENNIQENKLLPDAALLKSVSSGC 195

Query: 177 LDPTGWIHRNPVRDNYLEYPGMDFGAIYGMRRS 275
           L    W+H   V+ ++L++PG+DF   YGMRR+
Sbjct: 196 LRSVEWLHGAAVKPSFLDFPGIDFENAYGMRRA 228


>ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|222859086|gb|EEE96633.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   LSEVFCEFKKDLLANEATGT-SLSEVLQIQIPVVT--DKNLTIEEKVLPQINMPKSASSD 173
           L+EVF E KKDLL  EA  T SL+E+L I++PVV   D+N   E K+ P   + KS SS 
Sbjct: 100 LNEVFYECKKDLLEKEAMDTQSLAELLDIKLPVVRTDDENPIKENKLPPDAALSKSVSSG 159

Query: 174 CLDPTGWIHRNPVRDNYLEYPGMDFGAIYGMRRS 275
           CL    W+H   V+ ++L++PG+DF   YGMRR+
Sbjct: 160 CLSSIEWVHGAAVKPSFLDFPGIDFENAYGMRRA 193


>ref|XP_002513547.1| conserved hypothetical protein [Ricinus communis]
           gi|223547455|gb|EEF48950.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   LSEVFCEFKKDLLANEATGTSLSEVLQIQIPVV-TDKNLTIEEKVLPQINMPKSASSDCL 179
           LSEVF E KKDL+        +SE+L I+IPVV T +N            +PKS SS CL
Sbjct: 106 LSEVFYECKKDLMEKANIEIPVSEILDIKIPVVRTVENQIQGNNYFSDAQLPKSVSSGCL 165

Query: 180 DPTGWIHRNPVRDNYLEYPGMDFGAIYGMRRS 275
               W+H   V+ N+LE+ GMD GA YGMRR+
Sbjct: 166 SSLEWVHGAAVKPNFLEFSGMDLGAAYGMRRA 197


>ref|XP_003588527.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355477575|gb|AES58778.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
           gi|388513829|gb|AFK44976.1| unknown [Medicago
           truncatula]
          Length = 282

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   LSEVFCEFKKDLLANEATGTSLSEVLQIQIPVVT-DKNLTIEEKVLPQINMPKSASSDCL 179
           LSEV+ + KKDLL      + LSE+L+I+IP +  D+N   E K +P + + KS SS  L
Sbjct: 106 LSEVYYDCKKDLLEKATIESPLSEILEIKIPALNIDENSIQENKPIPDVLLSKSVSSGNL 165

Query: 180 DPTGWIHRNPVRDNYLEYPGMDFGAIYGMRRS 275
               W+H   ++  +L++PG+DF A+YGMRR+
Sbjct: 166 SSMDWMHGPAMKPAFLDFPGIDFNAVYGMRRA 197


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