BLASTX nr result

ID: Bupleurum21_contig00033933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033933
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   135   5e-30
ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   134   6e-30
ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|22...   131   5e-29
emb|CBI15223.3| unnamed protein product [Vitis vinifera]              131   7e-29
ref|XP_004162952.1| PREDICTED: probable glucuronoxylan glucurono...   127   1e-27

>ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 472

 Score =  135 bits (339), Expect = 5e-30
 Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
 Frame = -3

Query: 466 FLFRLNDNTYMPTNF-EMIDDDNTSKHVESDLRQPPSQYSVSISIFSNQTEISQEVVDQG 290
           FL  L++++++P +  E++  +NTS   + + ++   Q       FSN +          
Sbjct: 29  FLIHLSNHSFIPRSVSELVLVNNTSLDFKPNFKR--EQVQPQSCQFSNSSH--------- 77

Query: 289 TYVTKIGSLRYDKENLCDTTRAVLRVYMYDLPPEFHFGLMGWSRSGNQVWPDVSNMSKIP 110
               K  S R  ++  CD T A+LRV+MYDLPPEFHFGL+ W  + NQ WP+V+N   IP
Sbjct: 78  ----KPSSPRQQRKIPCDPTNALLRVFMYDLPPEFHFGLLDWKGNVNQTWPNVNNPKHIP 133

Query: 109 RYPGGLNLQHSIAYWLTLDLLSSNSGEMLRPCTAIR 2
            YPGGLNLQHS+ YWLTLDLLSSN  E  RPCTAIR
Sbjct: 134 PYPGGLNLQHSVEYWLTLDLLSSNIAENFRPCTAIR 169


>ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase isoform 1
           [Vitis vinifera]
          Length = 498

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/160 (43%), Positives = 107/160 (66%), Gaps = 5/160 (3%)
 Frame = -3

Query: 466 FLFRLNDNTYMPTN-FEMIDDDNTSKHVESDLRQPPSQYSVSISIFS---NQTEISQEVV 299
           FL + ++ +++P + F++I  ++TS + +S  +   ++     S+ S   ++  + +E  
Sbjct: 29  FLLQFSNTSFIPNSVFKLILVNSTSVYFKSSGKNEQTKLPFVTSVASPVDSKRPMGREGS 88

Query: 298 DQGTYVTK-IGSLRYDKENLCDTTRAVLRVYMYDLPPEFHFGLMGWSRSGNQVWPDVSNM 122
            Q +  +K + +L   +   CD  +A LR +MYDLPPEFHFGL+GW+   NQ+WP+VSN 
Sbjct: 89  CQISNASKKMDALGQGRRKGCDPNQAHLRAFMYDLPPEFHFGLLGWTGKANQIWPNVSNP 148

Query: 121 SKIPRYPGGLNLQHSIAYWLTLDLLSSNSGEMLRPCTAIR 2
            +IP YPGGLNLQHSI YWLTLDLLSS++  ++RPC+AIR
Sbjct: 149 GRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNIVRPCSAIR 188


>ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|223546364|gb|EEF47866.1|
           catalytic, putative [Ricinus communis]
          Length = 490

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/155 (40%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
 Frame = -3

Query: 463 LFRLNDNTYMPTN-FEMIDDDNTSKHVESDLRQPPSQYSVSISIFSNQTEISQEVVDQGT 287
           L +L+  +++P++  ++I  ++TS +++S+++    ++    S  S  T  S     +  
Sbjct: 30  LLQLSSTSFLPSSVIKLILVNSTSIYLKSNVKNELGKFPFFSSKPSQDTRSSMRSGGENC 89

Query: 286 YVTKIGSLRYDKENLCDTTRAVLRVYMYDLPPEFHFGLMGWSRSGNQVWPDVSNMSKIPR 107
              ++ +      N C+  + +L+VYMYD+PPEFHFGL+GW    NQ+WP+V ++  IP 
Sbjct: 90  SNFEVAASGKHIGNTCNPNQGLLKVYMYDMPPEFHFGLLGWKGKANQIWPNVDDLDHIPL 149

Query: 106 YPGGLNLQHSIAYWLTLDLLSSNSGEMLRPCTAIR 2
           YPGGLNLQHSI YWLTLDLL+SN  +++RPC A+R
Sbjct: 150 YPGGLNLQHSIEYWLTLDLLASNRPKVVRPCGAVR 184


>emb|CBI15223.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  131 bits (329), Expect = 7e-29
 Identities = 57/93 (61%), Positives = 73/93 (78%)
 Frame = -3

Query: 280 TKIGSLRYDKENLCDTTRAVLRVYMYDLPPEFHFGLMGWSRSGNQVWPDVSNMSKIPRYP 101
           +K+ +L   +   CD  +A LR +MYDLPPEFHFGL+GW+   NQ+WP+VSN  +IP YP
Sbjct: 53  SKMDALGQGRRKGCDPNQAHLRAFMYDLPPEFHFGLLGWTGKANQIWPNVSNPGRIPSYP 112

Query: 100 GGLNLQHSIAYWLTLDLLSSNSGEMLRPCTAIR 2
           GGLNLQHSI YWLTLDLLSS++  ++RPC+AIR
Sbjct: 113 GGLNLQHSIEYWLTLDLLSSDTPNIVRPCSAIR 145


>ref|XP_004162952.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like, partial [Cucumis sativus]
          Length = 339

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 7/162 (4%)
 Frame = -3

Query: 466 FLFRLNDNTYMPTN-FEMIDDDNTSKHVESDLRQPPSQYSVSISIFSNQTEISQEVVDQ- 293
           F+ + N N++ P++  + I  +NTS +++ ++   P +        +   E  + V D+ 
Sbjct: 29  FILQSNYNSFFPSSVLKFIVVNNTSNYLKPNVEDEPMELP------TQPGEAKEAVTDRD 82

Query: 292 -----GTYVTKIGSLRYDKENLCDTTRAVLRVYMYDLPPEFHFGLMGWSRSGNQVWPDVS 128
                  +V    S+    +  CD  +A LRV+MYDLPP +HFGL+GW    +Q+WP VS
Sbjct: 83  VDYPVSNFVKDEVSVENQSDLGCDPAKARLRVFMYDLPPLYHFGLLGWKGEKDQIWPYVS 142

Query: 127 NMSKIPRYPGGLNLQHSIAYWLTLDLLSSNSGEMLRPCTAIR 2
           N S+IP YPGGLNLQHS+ YWLTLDLLSSN  +M   CTA+R
Sbjct: 143 NRSQIPPYPGGLNLQHSMEYWLTLDLLSSNVPDMDHTCTAVR 184


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