BLASTX nr result

ID: Bupleurum21_contig00033893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033893
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      94   2e-17
gb|ABD78322.1| polyprotein [Primula vulgaris]                          91   8e-17
emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]    89   3e-16
emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]    89   5e-16
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    86   2e-15

>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
 Frame = +1

Query: 46  SKLPALLPTPGVEKKMLEVNESASSTVNLNQHASHNSWPVKKLSREEMERRSKLNLCYHC 225
           S   ALLPTP              +   L    ++ + P +K + +EM+ R    LC  C
Sbjct: 357 SNTTALLPTP----------RFTENPKTLPYKPNNTNKPTRKFTYDEMQERRTKGLCMFC 406

Query: 226 DETYRPGH--KCLKKQLYVLIEEEDAEVDEKATEIKYASEI----PAEGDMTI--HALTG 381
           DE Y PGH  K  K Q++V+  EED   DE+        E     P E   TI  +AL G
Sbjct: 407 DEPYTPGHHLKHRKSQIFVMECEEDDLDDEQEVNATVEEEDAVVNPNEEQPTISANALNG 466

Query: 382 PTSANALKMIGNIGKHKLNILIDSGCTHSFLDAVVAQKLNC 504
            T+ N ++++G  GKHKL+I +D G TH+F+D  VA+++NC
Sbjct: 467 STTFNCMRLMGQYGKHKLHIFVDPGSTHNFIDIKVAKEINC 507


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/127 (33%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
 Frame = +1

Query: 103 NESASSTVNLNQHASHNSWPVKKLSREEMERRSKLNLCYHCDETYRPGHKCLKKQLYVL- 279
           N  A+ +   N  A     P+K+L+++E+  R + NLCY+CDE +  GH C+K ++++L 
Sbjct: 190 NNQATFSKTNNTTAITKLPPIKRLTQDELTDRRQKNLCYNCDEKWFRGHVCVKPKIFLLQ 249

Query: 280 -IEEEDAEVDEKATEIKYASEIPAEGDMTIHALTGPTSANALKMIGNIGKHKLNILIDSG 456
            +EE + E++E++ E    + +    ++T+ A+TG T++ +++ +G +   K++IL+DSG
Sbjct: 250 NVEEFENEINEESVEEIDENIVGENAEITLQAITGVTNSTSIRFVGKLKGQKVSILVDSG 309

Query: 457 CTHSFLD 477
            TH+F+D
Sbjct: 310 STHNFID 316


>emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]
          Length = 1365

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/105 (44%), Positives = 67/105 (63%)
 Frame = +1

Query: 160 PVKKLSREEMERRSKLNLCYHCDETYRPGHKCLKKQLYVLIEEEDAEVDEKATEIKYASE 339
           P++KLS  E++RR +  LCY+CDE Y  GHKC KK  ++ +EEE    +E++ E +Y  E
Sbjct: 523 PIRKLSPTELQRRRQQRLCYNCDEKYTMGHKC-KKLFFIELEEE----NEESIEEEYVEE 577

Query: 340 IPAEGDMTIHALTGPTSANALKMIGNIGKHKLNILIDSGCTHSFL 474
            P    +++HAL G  S   +++   IGK  L ILIDSG TH+FL
Sbjct: 578 TPT---ISLHALAGVQSPQTMQIHSQIGKTPLTILIDSGSTHNFL 619


>emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]
          Length = 361

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/116 (38%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 160 PVKKLSREEMERRSKLNLCYHCDETYRPGHKCLKKQLYVLIEE--EDAEVDEKATEIKYA 333
           PVK+LS EEM++R    LC++CD+    GH+C   QL +L     +D+E D K  E    
Sbjct: 218 PVKRLSWEEMQKRRAQGLCFNCDDKSTSGHRCKGPQLLLLEGNINDDSEGDTKEAE---- 273

Query: 334 SEIPAEGDMTIHALTGPTSANALKMIGNIGKHKLNILIDSGCTHSFLDAVVAQKLN 501
           +++P++ ++++HALTG T+   +++   IG H + +LIDSG TH+F+   VA  L+
Sbjct: 274 ADLPSDPEISLHALTGWTATKTMRVTAKIGTHDIVVLIDSGSTHNFISDKVAALLH 329


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
 Frame = +1

Query: 4    ERKSRANIGRPSNVSKLPALLPTPGV-EKKMLEVNESASSTVNLNQHASHNSWPVKKLSR 180
            +R       R  N  K   +L T    E K+ E  ++ +  V     +     P+K+L+ 
Sbjct: 922  DRNLAMRAAREPNGPKSTKMLSTANRGEWKIGENFQTRAVAVGEKTMSQRREIPIKRLTE 981

Query: 181  EEMERRSKLNLCYHCDETYRPGHKCLKKQLYVLI-----EEEDAEVDEKATEIKYASEIP 345
             E++ R +  L + C+E + PGH+C KK+L VL+     EE+D + D++ATE     E+ 
Sbjct: 982  SELQARREKGLWFKCEEKFSPGHRC-KKELRVLLVHEDEEEDDNQFDDRATEEPALIELK 1040

Query: 346  AEGDMTIHALTGPTSANALKMIGNIGKHKLNILIDSGCTHSFLDAVVAQKL 498
               +++++++ G T+   +K+ G IG  ++ IL+DSG TH+FL   + Q+L
Sbjct: 1041 DAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQL 1091


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