BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033874
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   188   4e-46
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              188   4e-46
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   164   7e-39
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  188 bits (477), Expect = 4e-46
 Identities = 93/148 (62%), Positives = 117/148 (79%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   KPQTLNFCR--PNNHFSLKKTHQVSVFTTNTIYSKDSNFNICQLCLHGKLEEALTKLSLL 175
           KP+ LNF R       SL+K H++SV   ++I +++ N  I +LCL G LE+AL  L  +
Sbjct: 26  KPKPLNFSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLILELCLKGDLEKALIHLDSM 85

Query: 176 QDLQICVEEETYIALLKLCEWKRAANEGSQVYGYVCKFVSHLSVRLGNALLSMFVRLGNL 355
           Q+LQ+ VEEETYIALL+LCEWKRAA+EGS+V+ YV K V+ L VRLGNALLSMFVR G+L
Sbjct: 86  QELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDL 145

Query: 356 VDAWYVFGKMSERDIFSWNVMVGGYAKA 439
           V+AWYVFGKM+ERD+FSWNV+VGGYAKA
Sbjct: 146 VEAWYVFGKMAERDLFSWNVLVGGYAKA 173


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  188 bits (477), Expect = 4e-46
 Identities = 93/148 (62%), Positives = 117/148 (79%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   KPQTLNFCR--PNNHFSLKKTHQVSVFTTNTIYSKDSNFNICQLCLHGKLEEALTKLSLL 175
           KP+ LNF R       SL+K H++SV   ++I +++ N  I +LCL G LE+AL  L  +
Sbjct: 26  KPKPLNFSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLILELCLKGDLEKALIHLDSM 85

Query: 176 QDLQICVEEETYIALLKLCEWKRAANEGSQVYGYVCKFVSHLSVRLGNALLSMFVRLGNL 355
           Q+LQ+ VEEETYIALL+LCEWKRAA+EGS+V+ YV K V+ L VRLGNALLSMFVR G+L
Sbjct: 86  QELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDL 145

Query: 356 VDAWYVFGKMSERDIFSWNVMVGGYAKA 439
           V+AWYVFGKM+ERD+FSWNV+VGGYAKA
Sbjct: 146 VEAWYVFGKMAERDLFSWNVLVGGYAKA 173


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/150 (55%), Positives = 111/150 (74%), Gaps = 5/150 (3%)
 Frame = +2

Query: 5   PQTLNFCR--PNNHFSLKKTHQVSVF---TTNTIYSKDSNFNICQLCLHGKLEEALTKLS 169
           P+TL+F +    +  +L+KT ++SV     +++   +  N  + +LCL G LE+A+ +L 
Sbjct: 27  PKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQGNLEQAMKRLE 86

Query: 170 LLQDLQICVEEETYIALLKLCEWKRAANEGSQVYGYVCKFVSHLSVRLGNALLSMFVRLG 349
            + +L+I VEE+ YIALL+LCEW+RA +EGS+VY  V    S L VRLGNALLSMFVR G
Sbjct: 87  SMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFG 146

Query: 350 NLVDAWYVFGKMSERDIFSWNVMVGGYAKA 439
           NL+DAWYVFGKMSERD+FSWNV+VGGYAKA
Sbjct: 147 NLLDAWYVFGKMSERDVFSWNVLVGGYAKA 176



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = +2

Query: 137 GKLEEALTKLSLLQDLQICVEEETYIALLKLCEWKRAANEGSQVYGYVCKFVSHLSVRLG 316
           G  +EAL     +   +I     T+ ++LK C        G +++ +V +F     V +G
Sbjct: 177 GCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVG 236

Query: 317 NALLSMFVRLGNLVDAWYVFGKMSERDIFSWNVMVGGY 430
           NAL++M+V+ G++ +A  +F KM +RD  SWN M+ GY
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGY 274


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/150 (55%), Positives = 111/150 (74%), Gaps = 5/150 (3%)
 Frame = +2

Query: 5   PQTLNFCR--PNNHFSLKKTHQVSVF---TTNTIYSKDSNFNICQLCLHGKLEEALTKLS 169
           P+TL+F +    +  +L+KT ++SV     +++   +  N  + +LCL G LE+A+ +L 
Sbjct: 27  PKTLSFSKNLQTHKHTLRKTQEISVVGAAVSHSAIDQTQNLELRELCLQGNLEQAMKRLE 86

Query: 170 LLQDLQICVEEETYIALLKLCEWKRAANEGSQVYGYVCKFVSHLSVRLGNALLSMFVRLG 349
            + +L+I VEE+ YIALL+LCEW+RA +EGS+VY  V    S L VRLGNALLSMFVR G
Sbjct: 87  SMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFG 146

Query: 350 NLVDAWYVFGKMSERDIFSWNVMVGGYAKA 439
           NL+DAWYVFGKMSERD+FSWNV+VGGYAKA
Sbjct: 147 NLLDAWYVFGKMSERDVFSWNVLVGGYAKA 176



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/98 (32%), Positives = 54/98 (55%)
 Frame = +2

Query: 137 GKLEEALTKLSLLQDLQICVEEETYIALLKLCEWKRAANEGSQVYGYVCKFVSHLSVRLG 316
           G  +EAL     +   +I     T+ ++LK C        G +++ +V +F     V +G
Sbjct: 177 GCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVG 236

Query: 317 NALLSMFVRLGNLVDAWYVFGKMSERDIFSWNVMVGGY 430
           NAL++M+V+ G++ +A  +F KM +RD  SWN M+ GY
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGY 274


>ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/121 (60%), Positives = 97/121 (80%)
 Frame = +2

Query: 77  TTNTIYSKDSNFNICQLCLHGKLEEALTKLSLLQDLQICVEEETYIALLKLCEWKRAANE 256
           TT+   + + N +I QLCL G L+ A++ L  + +L+I VE++ Y+AL++LCEWKRA  E
Sbjct: 65  TTSLSSNHNPNSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKE 124

Query: 257 GSQVYGYVCKFVSHLSVRLGNALLSMFVRLGNLVDAWYVFGKMSERDIFSWNVMVGGYAK 436
           GS+VY YV   +SHLS++LGNALLSMFVR GNLVDAWYVFG+M +R++FSWNV+VGGYAK
Sbjct: 125 GSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAK 184

Query: 437 A 439
           A
Sbjct: 185 A 185