BLASTX nr result

ID: Bupleurum21_contig00033865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033865
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241...   210   1e-52
emb|CBI16215.3| unnamed protein product [Vitis vinifera]              210   1e-52
ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|XP_003542823.1| PREDICTED: uncharacterized protein LOC100776...   193   1e-47
ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali...   190   1e-46

>ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera]
          Length = 694

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/163 (63%), Positives = 130/163 (79%)
 Frame = -3

Query: 491 MVFFDFNIPYTDSEKPNSIEKSTRLKLIIKSMELGYTGIAYNRSIKGVMSESDRCSIXXX 312
           M FFD NIPY  +      +KS+R+K+++K+MELGY+G+AYNR IKGVMS+SD CSI   
Sbjct: 1   MGFFDLNIPYDGTTAAG--DKSSRIKVVVKAMELGYSGVAYNRKIKGVMSDSDSCSIPPL 58

Query: 311 XXXXXXXXXXXXSANVNFHRNLLGIPKSTPFRQYTRLTVVVDSPAQSSALNSGNPILKTY 132
                       S++V FHR+LLG+P S+PFRQYTRLTV VDS  Q+SALNSGNP+LK+Y
Sbjct: 59  SLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVLKSY 118

Query: 131 DVVAVKPVNQNAFEQACRVAEVDLIAIDFSEKLPFRLKQPLVK 3
           D+VAV+P+NQNAF+QAC+V+EVDLIAIDFSEKLPFRLK P+VK
Sbjct: 119 DLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFRLKLPMVK 161


>emb|CBI16215.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/163 (63%), Positives = 130/163 (79%)
 Frame = -3

Query: 491 MVFFDFNIPYTDSEKPNSIEKSTRLKLIIKSMELGYTGIAYNRSIKGVMSESDRCSIXXX 312
           M FFD NIPY  +      +KS+R+K+++K+MELGY+G+AYNR IKGVMS+SD CSI   
Sbjct: 1   MGFFDLNIPYDGTTAAG--DKSSRIKVVVKAMELGYSGVAYNRKIKGVMSDSDSCSIPPL 58

Query: 311 XXXXXXXXXXXXSANVNFHRNLLGIPKSTPFRQYTRLTVVVDSPAQSSALNSGNPILKTY 132
                       S++V FHR+LLG+P S+PFRQYTRLTV VDS  Q+SALNSGNP+LK+Y
Sbjct: 59  SLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTRLTVAVDSSPQASALNSGNPVLKSY 118

Query: 131 DVVAVKPVNQNAFEQACRVAEVDLIAIDFSEKLPFRLKQPLVK 3
           D+VAV+P+NQNAF+QAC+V+EVDLIAIDFSEKLPFRLK P+VK
Sbjct: 119 DLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFRLKLPMVK 161


>ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  195 bits (496), Expect = 3e-48
 Identities = 97/161 (60%), Positives = 122/161 (75%)
 Frame = -3

Query: 485 FFDFNIPYTDSEKPNSIEKSTRLKLIIKSMELGYTGIAYNRSIKGVMSESDRCSIXXXXX 306
           FFD NIP   +       K+TR+KL++K+MELGY+GIAYNRSIKG+MS+ DRC+I     
Sbjct: 2   FFDLNIPQDTT-------KTTRIKLVVKAMELGYSGIAYNRSIKGIMSDHDRCTIPLLSL 54

Query: 305 XXXXXXXXXXSANVNFHRNLLGIPKSTPFRQYTRLTVVVDSPAQSSALNSGNPILKTYDV 126
                     + +VN HR+LLGIP+S+PFRQYTRLTV VD+P+Q+  LNSGNP+LKTYD 
Sbjct: 55  SSLLDVAPALAFSVNLHRDLLGIPRSSPFRQYTRLTVSVDTPSQAQVLNSGNPVLKTYDF 114

Query: 125 VAVKPVNQNAFEQACRVAEVDLIAIDFSEKLPFRLKQPLVK 3
           VAVKP++Q AF+ AC  +EVD+IAIDFS KLPFRLK P+VK
Sbjct: 115 VAVKPLSQTAFDHACLKSEVDMIAIDFSVKLPFRLKLPMVK 155


>ref|XP_003542823.1| PREDICTED: uncharacterized protein LOC100776746 [Glycine max]
          Length = 582

 Score =  193 bits (491), Expect = 1e-47
 Identities = 100/164 (60%), Positives = 118/164 (71%), Gaps = 1/164 (0%)
 Frame = -3

Query: 491 MVFFDFNIPYTDSEKPNS-IEKSTRLKLIIKSMELGYTGIAYNRSIKGVMSESDRCSIXX 315
           M +FD NIPY D    N   E+  R +L +K+ME GYTGIAYNR+IKGVMS+  RCSI  
Sbjct: 1   MGYFDLNIPYPDPSPANKPTEQGNRTRLAVKAMEFGYTGIAYNRTIKGVMSDHHRCSISP 60

Query: 314 XXXXXXXXXXXXXSANVNFHRNLLGIPKSTPFRQYTRLTVVVDSPAQSSALNSGNPILKT 135
                        S + N HR+LL +P STPFRQYTRLTV VDS +Q+ ALNSGNPILKT
Sbjct: 61  LTLSSLLNVLPSLSLSANLHRHLLHVPLSTPFRQYTRLTVCVDSASQAQALNSGNPILKT 120

Query: 134 YDVVAVKPVNQNAFEQACRVAEVDLIAIDFSEKLPFRLKQPLVK 3
           YD+VAVKP+NQ AF+ AC   EVD+I+IDFS KLPFRLKQP+VK
Sbjct: 121 YDLVAVKPLNQIAFDLACERMEVDIISIDFSAKLPFRLKQPMVK 164


>ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana]
           gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30
           [Arabidopsis thaliana]
          Length = 581

 Score =  190 bits (482), Expect = 1e-46
 Identities = 95/167 (56%), Positives = 123/167 (73%), Gaps = 4/167 (2%)
 Frame = -3

Query: 491 MVFFDFNIPYTDSEKPNSIE----KSTRLKLIIKSMELGYTGIAYNRSIKGVMSESDRCS 324
           M FFD +IPY +  +    E    K+ RLKL  K+MELGY GIA+NRSIKGVMS+ D C+
Sbjct: 1   MGFFDLSIPYNEPPRSGGKEIAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSDKDSCT 60

Query: 323 IXXXXXXXXXXXXXXXSANVNFHRNLLGIPKSTPFRQYTRLTVVVDSPAQSSALNSGNPI 144
           I               +++V FHR+LLG+P++TPFRQYTRLTV V+S AQ  +LNSGNPI
Sbjct: 61  IPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNSGNPI 120

Query: 143 LKTYDVVAVKPVNQNAFEQACRVAEVDLIAIDFSEKLPFRLKQPLVK 3
           LK+YD++AV+P+NQNAF+ AC  AEVDLI+IDF++K+ FRLK P+VK
Sbjct: 121 LKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVK 167


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