BLASTX nr result

ID: Bupleurum21_contig00033864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033864
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870226.1| integral membrane family protein [Arabidopsi...    66   3e-09
ref|NP_567472.1| uncharacterized protein [Arabidopsis thaliana] ...    65   4e-09
ref|XP_002516872.1| conserved hypothetical protein [Ricinus comm...    59   4e-07
tpg|DAA60330.1| TPA: hypothetical protein ZEAMMB73_218809 [Zea m...    59   5e-07
tpg|DAA60329.1| TPA: hypothetical protein ZEAMMB73_218809, parti...    59   5e-07

>ref|XP_002870226.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|341958534|sp|D7MAF7.1|CSPL6_ARALL RecName:
           Full=CASP-like protein ARALYDRAFT_915236
           gi|297316062|gb|EFH46485.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 194

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/82 (43%), Positives = 48/82 (58%)
 Frame = +3

Query: 60  ENSKILVNNSSTTSSRLMVFDVILRVFLFATALTSVVALLTSKQTATIPLPFPPYRTIRT 239
           +  +  V  + TT+    +  V+LR  LFA  LTS+V ++TSKQT  I +P  P R I  
Sbjct: 11  DTERSTVPRTGTTTKSCSITQVVLRFVLFAATLTSIVVMVTSKQTKNIFIPGTPIR-IPA 69

Query: 240 GQYTNSPALIYSSAALWVTCIY 305
            ++TNSPALIY   AL V C Y
Sbjct: 70  AKFTNSPALIYFVVALSVACFY 91


>ref|NP_567472.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75170023|sp|Q9FE29.1|CSPLM_ARATH RecName:
           Full=CASP-like protein At4g15610
           gi|11908074|gb|AAG41466.1|AF326884_1 unknown protein
           [Arabidopsis thaliana] gi|21281195|gb|AAM44986.1|
           unknown protein [Arabidopsis thaliana]
           gi|21554675|gb|AAM63654.1| unknown [Arabidopsis
           thaliana] gi|110741052|dbj|BAE98620.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332658228|gb|AEE83628.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 193

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/95 (41%), Positives = 50/95 (52%)
 Frame = +3

Query: 87  SSTTSSRLMVFDVILRVFLFATALTSVVALLTSKQTATIPLPFPPYRTIRTGQYTNSPAL 266
           + TT+    +  V+LR  LFA  LTS+V ++TSKQT  I LP  P R I   ++TNSPAL
Sbjct: 19  TGTTTKSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIR-IPAAEFTNSPAL 77

Query: 267 IYSSAALWVTCIYXXXXXXXXXXXLMKRSATSTKL 371
           IY   AL V C Y             K S ++  L
Sbjct: 78  IYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLL 112


>ref|XP_002516872.1| conserved hypothetical protein [Ricinus communis]
           gi|238055376|sp|B9RT03.1|CSPL5_RICCO RecName:
           Full=CASP-like protein RCOM_0679870
           gi|223543960|gb|EEF45486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +3

Query: 120 DVILRVFLFATALTSVVALLTSKQTATIPLP-FPPYRTIRTGQYTNSPALIYSSAALWVT 296
           DV LRVFLFAT LT++V + T+KQT   P+P  P  R     ++ +SPA IY  AAL V 
Sbjct: 33  DVGLRVFLFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIYFVAALSVA 92

Query: 297 CIY 305
           C+Y
Sbjct: 93  CLY 95


>tpg|DAA60330.1| TPA: hypothetical protein ZEAMMB73_218809 [Zea mays]
          Length = 196

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +3

Query: 129 LRVFLFATALTSVVALLTSKQTATIPLP-FPPYRTIRTGQYTNSPALIYSSAALWVTCIY 305
           LRV LFA  L  +V L T+KQT  +P+P FP     R  ++T+SPALIY   AL VTC Y
Sbjct: 34  LRVLLFAVTLAGLVLLATAKQTVRVPIPQFPGLLLSRPAKFTDSPALIYLLVALVVTCFY 93


>tpg|DAA60329.1| TPA: hypothetical protein ZEAMMB73_218809, partial [Zea mays]
          Length = 144

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +3

Query: 129 LRVFLFATALTSVVALLTSKQTATIPLP-FPPYRTIRTGQYTNSPALIYSSAALWVTCIY 305
           LRV LFA  L  +V L T+KQT  +P+P FP     R  ++T+SPALIY   AL VTC Y
Sbjct: 34  LRVLLFAVTLAGLVLLATAKQTVRVPIPQFPGLLLSRPAKFTDSPALIYLLVALVVTCFY 93


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