BLASTX nr result

ID: Bupleurum21_contig00033856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033856
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat...   123   1e-26
emb|CBI38188.3| unnamed protein product [Vitis vinifera]              123   1e-26
emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]   123   1e-26
ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat...   119   3e-25
ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat...   115   4e-24

>ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/67 (80%), Positives = 62/67 (92%)
 Frame = -1

Query: 387 ERLALAFGLIRIPSGSPICIMKNLRICLDCHAMVKFISKVVQREIIIRDINRFHHFQDGV 208
           ERLAL+FG+IR PSGSPI IMKNLRIC+DCHA +K ISKVVQREI++RDINRFHHFQ+G+
Sbjct: 545 ERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGL 604

Query: 207 CSCADYW 187
           CSC DYW
Sbjct: 605 CSCGDYW 611


>emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/67 (80%), Positives = 62/67 (92%)
 Frame = -1

Query: 387 ERLALAFGLIRIPSGSPICIMKNLRICLDCHAMVKFISKVVQREIIIRDINRFHHFQDGV 208
           ERLAL+FG+IR PSGSPI IMKNLRIC+DCHA +K ISKVVQREI++RDINRFHHFQ+G+
Sbjct: 678 ERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGL 737

Query: 207 CSCADYW 187
           CSC DYW
Sbjct: 738 CSCGDYW 744


>emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/67 (80%), Positives = 62/67 (92%)
 Frame = -1

Query: 387 ERLALAFGLIRIPSGSPICIMKNLRICLDCHAMVKFISKVVQREIIIRDINRFHHFQDGV 208
           ERLAL+FG+IR PSGSPI IMKNLRIC+DCHA +K ISKVVQREI++RDINRFHHFQ+G+
Sbjct: 721 ERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGL 780

Query: 207 CSCADYW 187
           CSC DYW
Sbjct: 781 CSCGDYW 787


>ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/67 (77%), Positives = 61/67 (91%)
 Frame = -1

Query: 387 ERLALAFGLIRIPSGSPICIMKNLRICLDCHAMVKFISKVVQREIIIRDINRFHHFQDGV 208
           ERLALAFGLI+IPSG  I I+KNLRIC+DCHA++K +SK+VQREI+IRDINRFHHF+ GV
Sbjct: 714 ERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGV 773

Query: 207 CSCADYW 187
           CSC DYW
Sbjct: 774 CSCGDYW 780


>ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
           gi|449515059|ref|XP_004164567.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g13230,
           mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/67 (71%), Positives = 62/67 (92%)
 Frame = -1

Query: 387 ERLALAFGLIRIPSGSPICIMKNLRICLDCHAMVKFISKVVQREIIIRDINRFHHFQDGV 208
           ERLALAFGL+R+P+G PI I+KNLRIC+DCH+++K ISK+V R+II+RD+NRFHHF++G 
Sbjct: 655 ERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGS 714

Query: 207 CSCADYW 187
           CSCADYW
Sbjct: 715 CSCADYW 721


Top