BLASTX nr result

ID: Bupleurum21_contig00033828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033828
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               71   1e-10
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    71   1e-10
ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844...    70   1e-10
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    69   4e-10

>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/80 (42%), Positives = 44/80 (55%)
 Frame = +1

Query: 100  WESIRQRQSPPLWLHAIWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNA 279
            W  ++   +  LW  A+W    + K +FI W+   NRL T DRL R G ++ P C LCN 
Sbjct: 974  WSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCND 1033

Query: 280  ELESIEHLLVHCRFSSTIMS 339
              ES EHL   C+FSS I S
Sbjct: 1034 LDESREHLFFRCQFSSEIWS 1053


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/78 (42%), Positives = 43/78 (55%)
 Frame = +1

Query: 100 WESIRQRQSPPLWLHAIWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNA 279
           W  IR   +   W   +W   +I K +F +WLA+ NRLST DR+    M VD  C LCN 
Sbjct: 293 WNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNK 352

Query: 280 ELESIEHLLVHCRFSSTI 333
            LES +HL   C F++ I
Sbjct: 353 ALESRDHLFFSCPFATEI 370


>ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844973 [Brachypodium
           distachyon]
          Length = 448

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +1

Query: 148 IWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNAELESIEHLLVHCRFSS 327
           IW  W++ KC F  WLA+QNRL T DRL   G    P+CKLC    E+  HLL  CR+S 
Sbjct: 291 IWSPWALPKCRFFAWLAIQNRLWTNDRLAARGWPHQPLCKLCGVCPETAAHLLFDCRYSK 350

Query: 328 TIMS 339
            I S
Sbjct: 351 RIWS 354


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
 Frame = +1

Query: 34   IAIYRSDSISLDGADVVKLSTIWESIRQRQSPPLWLHAIWHNWSIKKCSFILWLALQNRL 213
            I+++RS     +   + K++  W ++R  Q    W   +W  +S  K SF+LWL +QNRL
Sbjct: 1322 ISLWRSLKNDFNKRFITKVT--WNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRL 1379

Query: 214  STADRLVRSGMNVDPICKLCNAELESIEHLLVHCRFSSTIMSA-SPCCLSQNWSDYQQGR 390
            ST DR+          C LCN   E+ +HL   C+++S +  A +   LS N+S      
Sbjct: 1380 STGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWNRL 1439

Query: 391  FTNSHSSPAVKQLSYLF 441
            FT   +S   +   +LF
Sbjct: 1440 FTLLCTSNLPRDHLFLF 1456


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = +1

Query: 133  LWLHAIWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNAELESIEHLLVH 312
            +W   I +N +  K  FILWLA+ NRL+TA+R+ R   +V P+CK+C  E+E+I+HL  +
Sbjct: 959  VWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFN 1018

Query: 313  CRFSSTI 333
            C +S  I
Sbjct: 1019 CIYSKEI 1025


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