BLASTX nr result
ID: Bupleurum21_contig00033828
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00033828 (445 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 71 1e-10 emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 71 1e-10 ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844... 70 1e-10 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 70 2e-10 emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 4e-10 >gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] Length = 1161 Score = 70.9 bits (172), Expect = 1e-10 Identities = 34/80 (42%), Positives = 44/80 (55%) Frame = +1 Query: 100 WESIRQRQSPPLWLHAIWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNA 279 W ++ + LW A+W + K +FI W+ NRL T DRL R G ++ P C LCN Sbjct: 974 WSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCND 1033 Query: 280 ELESIEHLLVHCRFSSTIMS 339 ES EHL C+FSS I S Sbjct: 1034 LDESREHLFFRCQFSSEIWS 1053 >emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1| putative protein [Arabidopsis thaliana] Length = 473 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/78 (42%), Positives = 43/78 (55%) Frame = +1 Query: 100 WESIRQRQSPPLWLHAIWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNA 279 W IR + W +W +I K +F +WLA+ NRLST DR+ M VD C LCN Sbjct: 293 WNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNK 352 Query: 280 ELESIEHLLVHCRFSSTI 333 LES +HL C F++ I Sbjct: 353 ALESRDHLFFSCPFATEI 370 >ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844973 [Brachypodium distachyon] Length = 448 Score = 70.5 bits (171), Expect = 1e-10 Identities = 32/64 (50%), Positives = 38/64 (59%) Frame = +1 Query: 148 IWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNAELESIEHLLVHCRFSS 327 IW W++ KC F WLA+QNRL T DRL G P+CKLC E+ HLL CR+S Sbjct: 291 IWSPWALPKCRFFAWLAIQNRLWTNDRLAARGWPHQPLCKLCGVCPETAAHLLFDCRYSK 350 Query: 328 TIMS 339 I S Sbjct: 351 RIWS 354 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 69.7 bits (169), Expect = 2e-10 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 1/137 (0%) Frame = +1 Query: 34 IAIYRSDSISLDGADVVKLSTIWESIRQRQSPPLWLHAIWHNWSIKKCSFILWLALQNRL 213 I+++RS + + K++ W ++R Q W +W +S K SF+LWL +QNRL Sbjct: 1322 ISLWRSLKNDFNKRFITKVT--WNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRL 1379 Query: 214 STADRLVRSGMNVDPICKLCNAELESIEHLLVHCRFSSTIMSA-SPCCLSQNWSDYQQGR 390 ST DR+ C LCN E+ +HL C+++S + A + LS N+S Sbjct: 1380 STGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWNRL 1439 Query: 391 FTNSHSSPAVKQLSYLF 441 FT +S + +LF Sbjct: 1440 FTLLCTSNLPRDHLFLF 1456 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 68.9 bits (167), Expect = 4e-10 Identities = 30/67 (44%), Positives = 45/67 (67%) Frame = +1 Query: 133 LWLHAIWHNWSIKKCSFILWLALQNRLSTADRLVRSGMNVDPICKLCNAELESIEHLLVH 312 +W I +N + K FILWLA+ NRL+TA+R+ R +V P+CK+C E+E+I+HL + Sbjct: 959 VWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFN 1018 Query: 313 CRFSSTI 333 C +S I Sbjct: 1019 CIYSKEI 1025