BLASTX nr result

ID: Bupleurum21_contig00033826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033826
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago ...    62   5e-08
ref|XP_001753788.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
 Frame = -1

Query: 347 MCIPPSHILAEENLVKRLHRYVLRI--SPVVHTRRQGLAP--EADSNKLKQCICSPTRHP 180
           MC P    +++ NLV    R VL+   +   H R +  A    A S  + +C+CSPTRHP
Sbjct: 1   MCHPGVLSVSQRNLVVYQRRLVLQAVETETSHARTEVAAGGGSAISRSINKCLCSPTRHP 60

Query: 179 GSFRCRQHQTKYVWGSR 129
           GSFRCR H++ YVW  R
Sbjct: 61  GSFRCRHHRSDYVWSGR 77


>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/77 (41%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = -1

Query: 347 MCIPPSHILAEENLVKRLHRYVLRISPV----VHTRRQGLAPEADSNKLKQCICSPTRHP 180
           MC PP       NLV      VL+          T        A +  +K+C+CSPTRHP
Sbjct: 1   MCHPPGVPWVSRNLVVYRRWLVLQAVETETGHAPTEVAATGSSAVAGSIKKCLCSPTRHP 60

Query: 179 GSFRCRQHQTKYVWGSR 129
           GSFRCR H++ YVWG R
Sbjct: 61  GSFRCRHHRSDYVWGGR 77


>ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago truncatula]
           gi|357521031|ref|XP_003630804.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
           gi|355523664|gb|AET04118.1| hypothetical protein
           MTR_8g083460 [Medicago truncatula]
           gi|355524826|gb|AET05280.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
          Length = 83

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = -1

Query: 227 DSNKLKQCICSPTRHPGSFRCRQHQTKYVWGSRKL 123
           +   +KQC+CSP++HPGSFRCRQHQ KYVW +R +
Sbjct: 48  EDGSIKQCVCSPSKHPGSFRCRQHQAKYVWRNRPI 82


>ref|XP_001753788.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695195|gb|EDQ81540.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 221

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = -1

Query: 347 MCIPPSHILAEENLVKRLHRYVLRISPVVHTRRQGLAPEADSNKLKQCICSPTRHPGSFR 168
           +C P SH   E +   RLHR V+R S +  + R   +    ++    C+C+PT HPGSFR
Sbjct: 5   LCAPTSH---EGSFRCRLHREVIR-SVIGASNRGSWSTVRQASAAVPCLCAPTSHPGSFR 60

Query: 167 CRQHQTKY-VWGSRKL 123
           CR H+TK   WG R L
Sbjct: 61  CRLHRTKEPSWGGRPL 76


>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = -1

Query: 215 LKQCICSPTRHPGSFRCRQHQTKYVWGSR 129
           +K C+CSPTRHPGSFRCR H   Y WG R
Sbjct: 58  IKMCVCSPTRHPGSFRCRHHHVDYAWGRR 86


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