BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033820
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   201   4e-50
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...   197   9e-49
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...   184   8e-45
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar...   161   6e-38

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  201 bits (512), Expect = 4e-50
 Identities = 98/139 (70%), Positives = 117/139 (84%)
 Frame = +2

Query: 2   KLEEAEGLIRNMPMNPNEVVLGSLLGSCSTHNKVQLGQRLMRELVQMYPLNVEYHILLSN 181
           +LEEAE L+R MP+ PNEVVLGSLLGSCS H K+QLG+ L++ELVQ+ P N EYHILLSN
Sbjct: 403 RLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSN 462

Query: 182 MYALDGKTDKANSLRRILKDRGISKVPGISSIHVGGQVHQFCAGDKSHPQTQDIYLMLDE 361
           MYAL GK ++ANSLR++LK RGI KVPG+SSIHVGGQVHQF AGDKSHP+T+++Y MLDE
Sbjct: 463 MYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDE 522

Query: 362 MIRKLKLYGYNPITTSQIF 418
           MI +L+L GY P T  Q F
Sbjct: 523 MIPRLRLAGYAPNTALQTF 541


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  197 bits (500), Expect = 9e-49
 Identities = 94/138 (68%), Positives = 117/138 (84%)
 Frame = +2

Query: 2   KLEEAEGLIRNMPMNPNEVVLGSLLGSCSTHNKVQLGQRLMRELVQMYPLNVEYHILLSN 181
           +LEEAE L++ +P+ PNEVVLGSLLG+C  H K++LG+++MRELVQM PLN EYHILLSN
Sbjct: 400 RLEEAEDLVKKLPIPPNEVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSN 459

Query: 182 MYALDGKTDKANSLRRILKDRGISKVPGISSIHVGGQVHQFCAGDKSHPQTQDIYLMLDE 361
           MYAL GK DKANSLR++LK+RGI KVPG+SSI+V GQ+H+F AGDKSHP+T DIY+ LD+
Sbjct: 460 MYALCGKADKANSLRKVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLDD 519

Query: 362 MIRKLKLYGYNPITTSQI 415
           MI KL+L GY P T  Q+
Sbjct: 520 MICKLRLAGYVPNTNCQV 537


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/138 (66%), Positives = 115/138 (83%)
 Frame = +2

Query: 5   LEEAEGLIRNMPMNPNEVVLGSLLGSCSTHNKVQLGQRLMRELVQMYPLNVEYHILLSNM 184
           LEEA  LI+ MPM PNEVVLGSLLGSC+ H K+QLG+R+++EL+QM   N EYH+LLSNM
Sbjct: 408 LEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNM 467

Query: 185 YALDGKTDKANSLRRILKDRGISKVPGISSIHVGGQVHQFCAGDKSHPQTQDIYLMLDEM 364
           Y L+GK DKANSLR+ILK +GI KVPG+SSI+VGG +HQF AGDKSHP T++IY  L+ M
Sbjct: 468 YVLEGKQDKANSLRQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNM 527

Query: 365 IRKLKLYGYNPITTSQIF 418
           I++L+L GY P TT+Q+F
Sbjct: 528 IQRLRLAGYVPNTTNQVF 545


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493561|gb|AES74764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  184 bits (466), Expect = 8e-45
 Identities = 86/138 (62%), Positives = 115/138 (83%)
 Frame = +2

Query: 2   KLEEAEGLIRNMPMNPNEVVLGSLLGSCSTHNKVQLGQRLMRELVQMYPLNVEYHILLSN 181
           +LEEAE +++NM + PNEVVLGSL+GSC  H ++QLG+++MR+L++M PLN EYHI+LSN
Sbjct: 408 RLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSN 467

Query: 182 MYALDGKTDKANSLRRILKDRGISKVPGISSIHVGGQVHQFCAGDKSHPQTQDIYLMLDE 361
           MYAL GK +KANSLR++LK RGI KVPG+SSI+V G++HQF AGDKSH +T +IY+ LDE
Sbjct: 468 MYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDE 527

Query: 362 MIRKLKLYGYNPITTSQI 415
           MI +L+  GY P T+ Q+
Sbjct: 528 MICRLRSAGYVPNTSCQV 545


>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15340, mitochondrial; Flags: Precursor
           gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
           thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/131 (57%), Positives = 103/131 (78%)
 Frame = +2

Query: 5   LEEAEGLIRNMPMNPNEVVLGSLLGSCSTHNKVQLGQRLMRELVQMYPLNVEYHILLSNM 184
           +EEAE L+R MP+ PNEVVLGSLLGSCS H KV++ +R+ REL+QM P N EY IL+SNM
Sbjct: 402 IEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNM 461

Query: 185 YALDGKTDKANSLRRILKDRGISKVPGISSIHVGGQVHQFCAGDKSHPQTQDIYLMLDEM 364
           Y  +G++D A+ LR  L+ RGI K+PG+SSI+V   VH+F +GD+SHP+T++IYL L+E+
Sbjct: 462 YVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521

Query: 365 IRKLKLYGYNP 397
           I +++  GY P
Sbjct: 522 IERIRSAGYVP 532