BLASTX nr result

ID: Bupleurum21_contig00033818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033818
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320489.1| argonaute protein group [Populus trichocarpa...   179   3e-43
ref|XP_002534129.1| eukaryotic translation initiation factor 2c,...   177   1e-42
ref|XP_003601587.1| Protein argonaute [Medicago truncatula] gi|3...   176   2e-42
gb|AFV15385.1| AGO6 [Solanum lycopersicum]                            174   9e-42
ref|XP_004140126.1| PREDICTED: protein argonaute 16-like [Cucumi...   171   6e-41

>ref|XP_002320489.1| argonaute protein group [Populus trichocarpa]
           gi|222861262|gb|EEE98804.1| argonaute protein group
           [Populus trichocarpa]
          Length = 869

 Score =  179 bits (453), Expect = 3e-43
 Identities = 94/159 (59%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
 Frame = -3

Query: 476 TMILTPGPVIDFLLANQSARDARAIDWVKARRILKNMRVKATHTNREFKIIGLSEKLCYQ 297
           TMILTPGPVIDFL+ NQ+ R+ R +DWVKARR+LKN+RVK  H N EFKIIGLSEK C Q
Sbjct: 228 TMILTPGPVIDFLIVNQNVREPRYVDWVKARRMLKNLRVKTKHNNMEFKIIGLSEKPCNQ 287

Query: 296 QYFTLKGRCGDGTGGQVQPMEISVYDYFANR-GLKPDSSAYFPCLDVGKPKRXXXXXXXX 120
           QYF +K +  DG   + Q +E++VYDYF    G++   SAY PCLDVGKPKR        
Sbjct: 288 QYFPMKLKNRDGANVEAQIVEVTVYDYFTKHCGIQLGYSAYLPCLDVGKPKRPNYLPLEL 347

Query: 119 XXXXXLQRYTMALSPSQRASLVEKSRQKPV*RKKVITDS 3
                LQRY  ALS  QRASLVEKSRQKP  R K +T++
Sbjct: 348 CSLISLQRYKKALSSMQRASLVEKSRQKPQERIKTVTEA 386


>ref|XP_002534129.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223525814|gb|EEF28257.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 863

 Score =  177 bits (448), Expect = 1e-42
 Identities = 93/159 (58%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
 Frame = -3

Query: 476 TMILTPGPVIDFLLANQSARDARAIDWVKARRILKNMRVKATHTNREFKIIGLSEKLCYQ 297
           TMILTPGPVIDFLLANQ+ R+ R IDWVKA+R+LKN+R+K  H N EFKI GLSEK C Q
Sbjct: 223 TMILTPGPVIDFLLANQNVREPRYIDWVKAKRMLKNLRIKPRHRNMEFKIRGLSEKPCNQ 282

Query: 296 QYFTLKGRCGDGTGGQVQPMEISVYDYFANR-GLKPDSSAYFPCLDVGKPKRXXXXXXXX 120
           QYF +K +  +    + Q +EI+VY+YF    G++   SA+ PCLDVGKPKR        
Sbjct: 283 QYFPMKMKNSESANAEPQTVEITVYEYFTRHCGIELTFSAFLPCLDVGKPKRPNYLPIEL 342

Query: 119 XXXXXLQRYTMALSPSQRASLVEKSRQKPV*RKKVITDS 3
                LQRYT ALS  QRASLVEKSRQKP+ R K +TD+
Sbjct: 343 CSLVSLQRYTKALSSVQRASLVEKSRQKPLDRIKTVTDA 381


>ref|XP_003601587.1| Protein argonaute [Medicago truncatula] gi|355490635|gb|AES71838.1|
           Protein argonaute [Medicago truncatula]
          Length = 947

 Score =  176 bits (446), Expect = 2e-42
 Identities = 93/159 (58%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
 Frame = -3

Query: 476 TMILTPGPVIDFLLANQSARDARAIDWVKARRILKNMRVKATHTNREFKIIGLSEKLCYQ 297
           T I+ PGPVIDFLL+NQS R+ R IDW KA+RILKN+RV+ATH N+EFKI G+SEK C Q
Sbjct: 303 TTIVKPGPVIDFLLSNQSVREPRYIDWAKAKRILKNLRVRATHRNQEFKISGMSEKPCIQ 362

Query: 296 QYFTLKGRCGDGTGGQVQPMEISVYDYFA-NRGLKPDSSAYFPCLDVGKPKRXXXXXXXX 120
           Q F++K + G+    + Q ++I+VY+YFA +RG++  SSAYFPCLDVGKP R        
Sbjct: 363 QLFSMKMKIGEDNNTE-QTVDITVYEYFAKHRGIELTSSAYFPCLDVGKPNRPNFLPLEL 421

Query: 119 XXXXXLQRYTMALSPSQRASLVEKSRQKPV*RKKVITDS 3
                LQRYT ALSP QRASLVEKSRQKP  + +V+T++
Sbjct: 422 CSLVPLQRYTKALSPVQRASLVEKSRQKPQEKIEVLTNA 460


>gb|AFV15385.1| AGO6 [Solanum lycopersicum]
          Length = 903

 Score =  174 bits (440), Expect = 9e-42
 Identities = 93/159 (58%), Positives = 113/159 (71%), Gaps = 1/159 (0%)
 Frame = -3

Query: 476 TMILTPGPVIDFLLANQSARDARAIDWVKARRILKNMRVKATHTNREFKIIGLSEKLCYQ 297
           TMIL+PGPVIDFLLANQ+ ++ R IDW +A+R+LKNMRVKA H NREFKIIGL++K C Q
Sbjct: 263 TMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNMRVKAKHDNREFKIIGLTDKPCNQ 322

Query: 296 QYFTLKGRCGDGTGGQVQPMEISVYDYFA-NRGLKPDSSAYFPCLDVGKPKRXXXXXXXX 120
           Q F++K + G       + ++I+VY YF  +R ++  SS Y PCLDVGKPKR        
Sbjct: 323 QLFSMKVKNGGSPDDGGETLDITVYQYFTKHRNIELSSSVYMPCLDVGKPKRPNYLPLEL 382

Query: 119 XXXXXLQRYTMALSPSQRASLVEKSRQKPV*RKKVITDS 3
                LQRYT ALS  QRASLVEKSRQKP  R KVITD+
Sbjct: 383 CYLVSLQRYTKALSSVQRASLVEKSRQKPRERIKVITDA 421


>ref|XP_004140126.1| PREDICTED: protein argonaute 16-like [Cucumis sativus]
          Length = 904

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/159 (57%), Positives = 114/159 (71%), Gaps = 1/159 (0%)
 Frame = -3

Query: 476 TMILTPGPVIDFLLANQSARDARAIDWVKARRILKNMRVKATHTNREFKIIGLSEKLCYQ 297
           TMIL PGPVIDFL+ANQ+ R+ R IDW KA+++LKN+RVKA H N EFKIIGLSEK C Q
Sbjct: 266 TMILKPGPVIDFLIANQNVREPRYIDWGKAKKMLKNLRVKARHRNMEFKIIGLSEKPCNQ 325

Query: 296 QYFTLKGRCGDGTGGQVQPMEISVYDYFANR-GLKPDSSAYFPCLDVGKPKRXXXXXXXX 120
           Q+F++K +    T G++  ++I+VY+YF    G++   SAY PCLDVGKPKR        
Sbjct: 326 QFFSMKLKNNGSTDGEM--VDITVYEYFVRHCGIELTHSAYLPCLDVGKPKRPTYIPLEL 383

Query: 119 XXXXXLQRYTMALSPSQRASLVEKSRQKPV*RKKVITDS 3
                LQRYT ALS  QRASLVEKSRQKP  + K++TD+
Sbjct: 384 CSLVSLQRYTKALSSMQRASLVEKSRQKPQEKIKIVTDA 422


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