BLASTX nr result

ID: Bupleurum21_contig00033813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033813
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271028.2| PREDICTED: uncharacterized protein LOC100255...   137   7e-31
emb|CAN79749.1| hypothetical protein VITISV_017357 [Vitis vinifera]   137   7e-31
emb|CAN76750.1| hypothetical protein VITISV_038957 [Vitis vinifera]   137   7e-31
ref|XP_002315169.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_003616591.1| hypothetical protein MTR_5g082130 [Medicago ...   133   2e-29

>ref|XP_002271028.2| PREDICTED: uncharacterized protein LOC100255315 [Vitis vinifera]
          Length = 523

 Score =  137 bits (346), Expect = 7e-31
 Identities = 79/163 (48%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
 Frame = +3

Query: 21  SKYNETE----------VFSQLKLDYLEPLMLGIXXXXXXXXXXXXILRASIERKVNRNE 170
           SKYNE +           FS  KLD L P  L I            I++ASIERK  R +
Sbjct: 113 SKYNEDDDGSSNMGFSASFSFSKLDSLRPSWLEIWPEPPNWPGRDEIIQASIERKAVRFD 172

Query: 171 IPLSLRMIKKKQQRHEGFGYARNLDICSFQKAFSSMEFIIIELQSCALHMREVLCDEDLG 350
           IP+SLRMIK+KQQ  EG     +   CS +KAFSSM FII ELQS +L ++E+L  EDL 
Sbjct: 173 IPVSLRMIKRKQQWEEGVTKGEDSVYCSVKKAFSSMVFIIRELQSYSLQIKEILYCEDLQ 232

Query: 351 RIIAKVQRDMHISLVWLFQQLFSQTPALMINVMVLLSSFSLYS 479
            I+++V R++H S VWLFQQ+FS+TP LM+ +M+LL++F++YS
Sbjct: 233 GILSRVHRELHASFVWLFQQVFSKTPTLMVYLMILLANFTVYS 275


>emb|CAN79749.1| hypothetical protein VITISV_017357 [Vitis vinifera]
          Length = 590

 Score =  137 bits (346), Expect = 7e-31
 Identities = 78/163 (47%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
 Frame = +3

Query: 21  SKYNETE----------VFSQLKLDYLEPLMLGIXXXXXXXXXXXXILRASIERKVNRNE 170
           S+YNE +           FS  KLD L P  L I            I++ASIERK  R +
Sbjct: 180 SRYNEDDDGSSNMGFSASFSSSKLDSLRPSWLEIWPEPPNWAGRDEIIQASIERKAVRFD 239

Query: 171 IPLSLRMIKKKQQRHEGFGYARNLDICSFQKAFSSMEFIIIELQSCALHMREVLCDEDLG 350
           IP+SLRMIK+KQQ  EG     +   CS +KAFSSM FII ELQS +L ++E+L  EDL 
Sbjct: 240 IPVSLRMIKRKQQWEEGVTKGEDSVYCSVKKAFSSMVFIIRELQSYSLQIKEILYCEDLQ 299

Query: 351 RIIAKVQRDMHISLVWLFQQLFSQTPALMINVMVLLSSFSLYS 479
            I+++V R++H S VWLFQQ+FS+TP LM+ +M+LL++F++YS
Sbjct: 300 GILSRVHRELHASFVWLFQQVFSKTPTLMVYLMILLANFTVYS 342


>emb|CAN76750.1| hypothetical protein VITISV_038957 [Vitis vinifera]
          Length = 628

 Score =  137 bits (346), Expect = 7e-31
 Identities = 79/163 (48%), Positives = 105/163 (64%), Gaps = 10/163 (6%)
 Frame = +3

Query: 21  SKYNETE----------VFSQLKLDYLEPLMLGIXXXXXXXXXXXXILRASIERKVNRNE 170
           SKYNE +           FS  KLD L P  L I            I++ASIERK  R +
Sbjct: 97  SKYNEDDDGSSNMGFSASFSFSKLDSLRPSWLEIWPEPPNWPGRDEIIQASIERKAVRFD 156

Query: 171 IPLSLRMIKKKQQRHEGFGYARNLDICSFQKAFSSMEFIIIELQSCALHMREVLCDEDLG 350
           IP+SLRMIK+KQQ  EG     +   CS +KAFSSM FII ELQS +L ++E+L  EDL 
Sbjct: 157 IPVSLRMIKRKQQWEEGVTKGEDSVYCSVKKAFSSMVFIIRELQSYSLQIKEILYCEDLQ 216

Query: 351 RIIAKVQRDMHISLVWLFQQLFSQTPALMINVMVLLSSFSLYS 479
            I+++V R++H S VWLFQQ+FS+TP LM+ +M+LL++F++YS
Sbjct: 217 GILSRVHRELHASFVWLFQQVFSKTPTLMVYLMILLANFTVYS 259


>ref|XP_002315169.1| predicted protein [Populus trichocarpa] gi|222864209|gb|EEF01340.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  134 bits (338), Expect = 6e-30
 Identities = 72/158 (45%), Positives = 103/158 (65%)
 Frame = +3

Query: 6   NGRSRSKYNETEVFSQLKLDYLEPLMLGIXXXXXXXXXXXXILRASIERKVNRNEIPLSL 185
           +G S    N ++ F   K+++LEP +LGI            I+R SIE + N  +IPLSL
Sbjct: 111 DGESSKNRNSSDSFLPSKIEFLEPSLLGIQPEPPDWPGRNEIVRMSIELRANSVDIPLSL 170

Query: 186 RMIKKKQQRHEGFGYARNLDICSFQKAFSSMEFIIIELQSCALHMREVLCDEDLGRIIAK 365
           RM+K+K +  +GF   RN   CS ++AF+SM  II ELQS AL+ R  L  EDL RI+ K
Sbjct: 171 RMLKRKLKWQKGFAVVRNSAYCSVKRAFASMVLIIQELQSHALYTRGSLHGEDLRRILEK 230

Query: 366 VQRDMHISLVWLFQQLFSQTPALMINVMVLLSSFSLYS 479
           V  +++ S VWLFQQ+FS+TP LM+ VM+LL++F+++S
Sbjct: 231 VHSELNASFVWLFQQVFSRTPTLMVYVMLLLANFTVHS 268


>ref|XP_003616591.1| hypothetical protein MTR_5g082130 [Medicago truncatula]
           gi|355517926|gb|AES99549.1| hypothetical protein
           MTR_5g082130 [Medicago truncatula]
           gi|388492924|gb|AFK34528.1| unknown [Medicago
           truncatula]
          Length = 416

 Score =  133 bits (334), Expect = 2e-29
 Identities = 75/142 (52%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
 Frame = +3

Query: 57  KLDYLEPLMLGIXXXXXXXXXXXXILRASIERKVNRNEIPLSLRMIKKKQQRHEGF-GYA 233
           K + LEP  LGI            ILR S ERKV    IPLS+RMIKKK Q  EG    A
Sbjct: 76  KREILEPSFLGIQPEPPSWPEREEILRLSFERKVKSVGIPLSIRMIKKKLQLEEGLKDEA 135

Query: 234 RNLDICSFQKAFSSMEFIIIELQSCALHMREVLCDEDLGRIIAKVQRDMHISLVWLFQQL 413
             L+ CS +K+FSSM F++ ELQ+ AL  RE+LC EDL  ++ K+ R+M  S VWLFQQ+
Sbjct: 136 SKLNNCSVKKSFSSMLFMLHELQNHALQTRELLCGEDLESVMVKLNREMDDSFVWLFQQV 195

Query: 414 FSQTPALMINVMVLLSSFSLYS 479
           FS+TP LM++VMV LS+FSL+S
Sbjct: 196 FSETPTLMVDVMVFLSNFSLFS 217


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