BLASTX nr result

ID: Bupleurum21_contig00033809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033809
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCD74518.1| putative nucleoredoxin 1 [Arabidopsis halleri su...    86   2e-14
gb|AAS02080.1| protein disulfide isomerase [Quercus suber]             84   7e-14
emb|CAC87937.1| PDI-like protein [Quercus suber]                       84   7e-14
ref|XP_002888143.1| DC1 domain-containing protein [Arabidopsis l...    83   9e-14
gb|AAM64945.1| PDI-like protein [Arabidopsis thaliana]                 83   1e-13

>emb|CCD74518.1| putative nucleoredoxin 1 [Arabidopsis halleri subsp. halleri]
          Length = 578

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
 Frame = -3

Query: 808 IKKGEFVNISDLLFTSSRDYLIKCNDNDGQQVKAEELAGKVVVIYFDSVLDMDTD-FIAY 632
           +  G+  ++  LL + +RD+L++   NDG+QVK + L GK + +YF +        F   
Sbjct: 8   VNGGDSQDLHSLLSSPARDFLVR---NDGEQVKIDSLIGKKIGLYFSAAWCGPCQRFTPQ 64

Query: 631 LIHTYNNLQHKCGFEXXXXXXXXXXDKLSGEISLAPSQGGPKKHFEDIISCMPWTAIPLS 452
           L+  YN L  K GFE            +SG+          ++ F D  S MPW A+P +
Sbjct: 65  LVEVYNELSSKVGFEIVF---------VSGDED--------EESFGDYFSKMPWLAVPFT 107

Query: 451 DITSRKRIERRFGVPVKIYIGTP--VVVDSTGMILQSHAYTIILNYGALGYPFSDERIDF 278
           D  SR R++  F V      G P  V+VD  G ++  +   +I +YGA  YPF+ E++  
Sbjct: 108 DSESRDRLDELFKVR-----GIPNLVMVDDHGKLVNENGVGVIRSYGADAYPFTPEKMKE 162

Query: 277 LDSEDYAAARQPSWR 233
           +  ++  A R+ + R
Sbjct: 163 IKEDEDRARREQTLR 177


>gb|AAS02080.1| protein disulfide isomerase [Quercus suber]
          Length = 506

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 64/195 (32%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 799 GEFVNIS----DLLFTSSRDYLIKCNDNDGQQVKAEELAGKVVVIYFD-SVLDMDTDFIA 635
           G+  N+S     LL +  RDYL++   N+G QVK   L GK V +YF  S       F  
Sbjct: 4   GDVDNVSHDLISLLSSEERDYLVR---NNGDQVKISNLIGKTVGLYFSGSWCGPCCHFTP 60

Query: 634 YLIHTYNNLQHKCGFEXXXXXXXXXXDKLSGEISLAPSQGGPKKHFEDIISCMPWTAIPL 455
            L+  Y  L  K  FE                     S     + F   ++ MPW AIP 
Sbjct: 61  NLVEVYEELLPKGDFEVVFI-----------------SSDRNDESFNGYLAKMPWLAIPF 103

Query: 454 SDITSRKRIERRF---GVPVKIYIGTPVVVDSTGMILQSHAYTIILNYGALGYPFSDERI 284
           SD  +RKR++  F   G+P  I++      D+TG ++ +    II  YG  GYPF+ ERI
Sbjct: 104 SDSETRKRLKELFKVRGIPNLIFL------DATGKVVTNQGVRIIGEYGVDGYPFTTERI 157

Query: 283 DFLDSEDYAAARQPS 239
           +FL  E+  A +  S
Sbjct: 158 NFLKEEEENAKKNQS 172



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 48/168 (28%), Positives = 75/168 (44%)
 Frame = -3

Query: 787 NISDLLFTSSRDYLIKCNDNDGQQVKAEELAGKVVVIYFDSVLDMDTDFIAYLIHTYNNL 608
           ++S +L   SR +L+    NDG +V   EL GK V +YF S+  +  DF   L+  Y  L
Sbjct: 172 SLSTILVHGSRSHLVS---NDGNEVPIPELEGKTVGLYF-SIKRLCLDFTPKLVEVYKKL 227

Query: 607 QHKCGFEXXXXXXXXXXDKLSGEISLAPSQGGPKKHFEDIISCMPWTAIPLSDITSRKRI 428
           + +                 S EI L  S    +  F++  + MPW A+P  D    K +
Sbjct: 228 KER---------------GESFEIVLI-SLDDEENDFKEGFNTMPWLAVPFKDKCCEK-L 270

Query: 427 ERRFGVPVKIYIGTPVVVDSTGMILQSHAYTIILNYGALGYPFSDERI 284
            R F +     + T VV+   G  L  +   +I  +G   YPF+ E++
Sbjct: 271 ARYFDLET---LPTVVVIGPDGKTLNPNVAELIEEHGIEAYPFTPEKL 315


>emb|CAC87937.1| PDI-like protein [Quercus suber]
          Length = 506

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 64/195 (32%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
 Frame = -3

Query: 799 GEFVNIS----DLLFTSSRDYLIKCNDNDGQQVKAEELAGKVVVIYFD-SVLDMDTDFIA 635
           G+  N+S     LL +  RDYL++   N+G QVK   L GK V +YF  S       F  
Sbjct: 4   GDVDNVSHDLISLLSSEERDYLVR---NNGDQVKISNLIGKTVGLYFSGSWCGPCCHFTP 60

Query: 634 YLIHTYNNLQHKCGFEXXXXXXXXXXDKLSGEISLAPSQGGPKKHFEDIISCMPWTAIPL 455
            L+  Y  L  K  FE                     S     + F   ++ MPW AIP 
Sbjct: 61  NLVEVYEELLPKGDFEVVFI-----------------SSDRNDESFNGYLAKMPWLAIPF 103

Query: 454 SDITSRKRIERRF---GVPVKIYIGTPVVVDSTGMILQSHAYTIILNYGALGYPFSDERI 284
           SD  +RKR++  F   G+P  I++      D+TG ++ +    II  YG  GYPF+ ERI
Sbjct: 104 SDSETRKRLKELFKVRGIPNLIFL------DATGKVVTNQGVRIIGEYGVDGYPFTTERI 157

Query: 283 DFLDSEDYAAARQPS 239
           +FL  E+  A +  S
Sbjct: 158 NFLKEEEENAKKNQS 172


>ref|XP_002888143.1| DC1 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333984|gb|EFH64402.1| DC1 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 578

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
 Frame = -3

Query: 808 IKKGEFVNISDLLFTSSRDYLIKCNDNDGQQVKAEELAGKVVVIYFDSVLDMDTD-FIAY 632
           +   + +++  LL + +RD+L++   NDG+QVK + L GK + +YF +        F   
Sbjct: 8   VNGSDALDLHSLLSSPARDFLVR---NDGEQVKIDSLIGKKIGLYFSAAWCGPCQRFTPQ 64

Query: 631 LIHTYNNLQHKCGFEXXXXXXXXXXDKLSGEISLAPSQGGPKKHFEDIISCMPWTAIPLS 452
           L+  YN L  K GFE            +SG+          ++ F D  S MPW A+P +
Sbjct: 65  LVEVYNELSSKVGFEIVF---------VSGDED--------EESFGDYFSKMPWLAVPFT 107

Query: 451 DITSRKRIERRFGVPVKIYIGTP--VVVDSTGMILQSHAYTIILNYGALGYPFSDERIDF 278
           D  +R R++  F V      G P  V+VD  G ++  +   +I +YGA  YPF+ E++  
Sbjct: 108 DSETRDRLDELFKVR-----GIPNLVMVDDHGKLVNENGVGVIRSYGADAYPFTPEKMKE 162

Query: 277 LDSEDYAAARQPSWR 233
           +  ++  A R+ + R
Sbjct: 163 IKEDEDRARREQTLR 177


>gb|AAM64945.1| PDI-like protein [Arabidopsis thaliana]
          Length = 578

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
 Frame = -3

Query: 787 NISDLLFTSSRDYLIKCNDNDGQQVKAEELAGKVVVIYFDSVLDMDTD-FIAYLIHTYNN 611
           ++  LL + +RD+L++   NDG+QVK + L GK + +YF +        F   L+  YN 
Sbjct: 15  DLHSLLSSPARDFLVR---NDGEQVKVDSLLGKKIGLYFSAAWCGPCQRFTPQLVEVYNE 71

Query: 610 LQHKCGFEXXXXXXXXXXDKLSGEISLAPSQGGPKKHFEDIISCMPWTAIPLSDITSRKR 431
           L  K GFE            +SG+          ++ F D  S MPW A+P +D  +R R
Sbjct: 72  LSSKVGFEIVF---------VSGDED--------EESFGDYFSKMPWLAVPFTDSETRDR 114

Query: 430 IERRFGVPVKIYIGTP--VVVDSTGMILQSHAYTIILNYGALGYPFSDERIDFLDSEDYA 257
           ++  F V      G P  V+VD  G ++  +   +I +YGA  YPF+ E++  +  ++  
Sbjct: 115 LDELFKVR-----GIPNLVMVDDHGKLVNENGVGVIRSYGADAYPFTPEKMKEIKEDEDR 169

Query: 256 AARQPSWR 233
           A R+ + R
Sbjct: 170 ARREQTLR 177


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