BLASTX nr result

ID: Bupleurum21_contig00033806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033806
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267174.1| PREDICTED: digestive organ expansion factor ...   177   3e-82
ref|XP_002520389.1| conserved hypothetical protein [Ricinus comm...   141   2e-64
ref|XP_002892963.1| hypothetical protein ARALYDRAFT_471979 [Arab...   153   4e-64
ref|XP_003533727.1| PREDICTED: U3 small nucleolar RNA-associated...   150   7e-64
ref|NP_564032.1| uncharacterized protein [Arabidopsis thaliana] ...   144   7e-63

>ref|XP_002267174.1| PREDICTED: digestive organ expansion factor homolog [Vitis vinifera]
            gi|296090307|emb|CBI40126.3| unnamed protein product
            [Vitis vinifera]
          Length = 753

 Score =  177 bits (448), Expect(2) = 3e-82
 Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
 Frame = -2

Query: 1036 QSAERQSGSDVTKKQRSRLVVVNKDTEDAGNYGD-EVSHLDDQYDINVKGRCAALTSVSK 860
            +  + + G+D    +      + + +EDA    D E S  D  +D++V  + A   S S 
Sbjct: 117  EEEDNEEGTDNESARGHASESIMEQSEDAETEDDNEASDTDQMHDLDVDDQSAVGASEST 176

Query: 859  SSFDEHFCYKLSKEEITDLTKGKRKNKCKENWEMAADNMSRCKWIGTGECFLEKKDIYKH 680
            SSF  H  +KLSKEE+ +LT+     K K NWEM A +MS CKW+GTGE FL+  +    
Sbjct: 177  SSFTSHVGHKLSKEEVDNLTR----RKWKYNWEMPAFDMSSCKWMGTGESFLKDVNTSSG 232

Query: 679  YGLKRKLYKHWSDIYNMESGGRDFNSSKQRSFFFLCNSYRDILYHNKKPFYLKGSKEDSS 500
            Y LK KLYKHW + Y   SGG DF+SSKQR FF LCNSYRDILY NKKPFYLKG +EDS 
Sbjct: 233  YDLKLKLYKHWLENYKT-SGGNDFHSSKQRLFFSLCNSYRDILYCNKKPFYLKGQEEDSC 291

Query: 499  IMDAYIMHS 473
            IMDAYIMH+
Sbjct: 292  IMDAYIMHA 300



 Score =  155 bits (393), Expect(2) = 3e-82
 Identities = 90/167 (53%), Positives = 109/167 (65%), Gaps = 11/167 (6%)
 Frame = -3

Query: 468 LVTKNDAEVAKLQANTKDLMLNSADFLDCGFTCPKXXXXXXXXXXXXLVVERLIQLTPPP 289
           LVTKND++VAK Q   K+ +L    FLD GFT PK             VV+RLIQLTP  
Sbjct: 310 LVTKNDSKVAKHQETVKEEILTGDSFLDHGFTRPKVLILLPLASIALRVVKRLIQLTPSS 369

Query: 288 SKHKEVDVENRGRFSDEYGMGT-----------NKLDGTENSKSVKSSQPSDFHKLFDGN 142
           SK   V+VE+  RFSDE+G G             K+   ENS   KSS+PSDF  LF  N
Sbjct: 370 SK---VNVEHIDRFSDEFGTGVVEDDQEQNELFQKVQDYENSIVQKSSKPSDFQALFGAN 426

Query: 141 NNDNFMIGIKISRNSIKLYNDFHASEMIVASPLGLITKIGEAEKDKE 1
           NND+FMIGIK +R +IKLY+DF++S+MI+ASPLGLITKIGEAE +KE
Sbjct: 427 NNDHFMIGIKFTRRTIKLYSDFYSSDMIIASPLGLITKIGEAEVEKE 473


>ref|XP_002520389.1| conserved hypothetical protein [Ricinus communis]
           gi|223540436|gb|EEF42005.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 721

 Score =  141 bits (356), Expect(2) = 2e-64
 Identities = 76/130 (58%), Positives = 90/130 (69%), Gaps = 2/130 (1%)
 Frame = -2

Query: 856 SFDEHFCYKLSKEEITDLTKGKRKNKCKENWEMAADNMSRCKWIGTGECFLEKKDIYKH- 680
           SF  H    LS+EE+ +L+  K + K    WE+ A     CKW+GTGECFL  KDI K+ 
Sbjct: 150 SFHVHLGSNLSEEEVQNLSNKKWEYK----WEVPAFGKLNCKWVGTGECFL--KDINKNS 203

Query: 679 -YGLKRKLYKHWSDIYNMESGGRDFNSSKQRSFFFLCNSYRDILYHNKKPFYLKGSKEDS 503
            YGLK +LYKHW D Y  +S G DF SSKQR FF LCNSYRDIL+ NK PFY+KG +EDS
Sbjct: 204 SYGLKERLYKHWLDAYK-KSRGNDFYSSKQRLFFSLCNSYRDILHCNKNPFYIKGVEEDS 262

Query: 502 SIMDAYIMHS 473
           SI DAYI+HS
Sbjct: 263 SIKDAYIIHS 272



 Score =  132 bits (331), Expect(2) = 2e-64
 Identities = 81/164 (49%), Positives = 105/164 (64%), Gaps = 6/164 (3%)
 Frame = -3

Query: 474 RHLVTKNDAEVAKLQANTKDLMLNSADFLDCGFTCPKXXXXXXXXXXXXLVVERLIQLTP 295
           R LV KND++VAK Q   ++ +L    FLD GFT PK             VV+RLIQLTP
Sbjct: 280 RDLVRKNDSKVAKHQKGAEEELLTIDGFLDHGFTRPKILILLPIRSIALRVVKRLIQLTP 339

Query: 294 PPSKHKEVDVENRGRFSDEYGMGTNKLDGTE------NSKSVKSSQPSDFHKLFDGNNND 133
              K   V+VE+  RF +E+G   ++ DG E      NSK +KSS+PSD   LF GNN+D
Sbjct: 340 QAYK---VNVEHVERFYNEFGTQDDE-DGDEFAQNVGNSKPLKSSKPSDHQALFGGNNDD 395

Query: 132 NFMIGIKISRNSIKLYNDFHASEMIVASPLGLITKIGEAEKDKE 1
           NFMIGIK +R SIKLY+DF++S+MIVASP+ +  +I EA  +KE
Sbjct: 396 NFMIGIKFTRRSIKLYSDFYSSDMIVASPVAVHGRIEEAMGNKE 439


>ref|XP_002892963.1| hypothetical protein ARALYDRAFT_471979 [Arabidopsis lyrata subsp.
           lyrata] gi|297338805|gb|EFH69222.1| hypothetical protein
           ARALYDRAFT_471979 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  153 bits (387), Expect(2) = 4e-64
 Identities = 81/170 (47%), Positives = 106/170 (62%)
 Frame = -2

Query: 982 LVVVNKDTEDAGNYGDEVSHLDDQYDINVKGRCAALTSVSKSSFDEHFCYKLSKEEITDL 803
           L++ N D +      D+    D+++D++  G+     S S S+F EH  +KLS EE+  L
Sbjct: 133 LMMENNDNQSEEEDPDDYE-TDEEHDLSTNGQSFVDASSSVSAFSEHLSHKLSSEEVNTL 191

Query: 802 TKGKRKNKCKENWEMAADNMSRCKWIGTGECFLEKKDIYKHYGLKRKLYKHWSDIYNMES 623
            KGK K K    WE  A +M  C+W GT E FL+       YGLK KLYKHW  +Y  +S
Sbjct: 192 PKGKWKFK----WESLAFDMPNCRWKGTSENFLDGIQSDATYGLKPKLYKHWLQLYK-KS 246

Query: 622 GGRDFNSSKQRSFFFLCNSYRDILYHNKKPFYLKGSKEDSSIMDAYIMHS 473
           GG+D +SSK+R FF +CN+Y DIL+ NKKPFY  GS EDSS MDAY+MHS
Sbjct: 247 GGKDLDSSKRRKFFSICNNYLDILHSNKKPFYHSGSDEDSSAMDAYLMHS 296



 Score =  119 bits (297), Expect(2) = 4e-64
 Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 9/167 (5%)
 Frame = -3

Query: 474 RHLVTKNDAEVAKLQANTKDLMLNSADFLDCGFTCPKXXXXXXXXXXXXLVVERLIQLTP 295
           R LV KN++++AK +  +++ +L+   FLD GFT PK             VV+RLIQLTP
Sbjct: 304 RDLVKKNESKIAKHREISEEEILSDDGFLDQGFTRPKVLILLPLRSIAFRVVKRLIQLTP 363

Query: 294 PPSKHKEVDVENRGRFSDEYGMGTNKLDGTE--------NSKSVKSSQPSDFHKLFDGNN 139
              + + V VE+  RF+DE+G      DG          NS + KSS+PSD+  LF  +N
Sbjct: 364 ---ESQRVSVEHLDRFNDEFGCEEATDDGDVEKNTSKKGNSTTQKSSKPSDWQSLFGASN 420

Query: 138 NDN-FMIGIKISRNSIKLYNDFHASEMIVASPLGLITKIGEAEKDKE 1
           ND+ FM+GIK +R SI+LY DF++S++I+ASPL L    G+AE++KE
Sbjct: 421 NDDEFMLGIKHTRKSIRLYGDFYSSDIIIASPLKLQMTFGQAEENKE 467


>ref|XP_003533727.1| PREDICTED: U3 small nucleolar RNA-associated protein 25-like
           [Glycine max]
          Length = 675

 Score =  150 bits (380), Expect(2) = 7e-64
 Identities = 83/155 (53%), Positives = 103/155 (66%)
 Frame = -2

Query: 937 DEVSHLDDQYDINVKGRCAALTSVSKSSFDEHFCYKLSKEEITDLTKGKRKNKCKENWEM 758
           ++V    D+ DI + G+  +  S+  SSFD H  + LSKEEI     G+R  K   +WE 
Sbjct: 86  EDVGFHSDEEDIGITGQPTSDDSLHLSSFDLHLQHNLSKEEID----GQRNRKF--SWET 139

Query: 757 AADNMSRCKWIGTGECFLEKKDIYKHYGLKRKLYKHWSDIYNMESGGRDFNSSKQRSFFF 578
            A  MS CKWIGTGE  LE  DI   +GLK KL +HW D+Y   +GG+D +S KQ+ FF 
Sbjct: 140 PAIGMSNCKWIGTGENILEDLDINSCHGLKSKLSEHWMDVYR-TAGGKDISSPKQKIFFS 198

Query: 577 LCNSYRDILYHNKKPFYLKGSKEDSSIMDAYIMHS 473
           LC+SYRDILY NK+PFYLKG  ED+SIMDAYIMHS
Sbjct: 199 LCSSYRDILYCNKRPFYLKG-LEDTSIMDAYIMHS 232



 Score =  120 bits (302), Expect(2) = 7e-64
 Identities = 74/163 (45%), Positives = 98/163 (60%), Gaps = 5/163 (3%)
 Frame = -3

Query: 474 RHLVTKNDAEVAKLQANTKDLMLNSADFLDCGFTCPKXXXXXXXXXXXXLVVERLIQLTP 295
           R  V KND+++ KL+ N      +S  F D GFT PK             VV+RLIQLTP
Sbjct: 240 RDCVKKNDSKLTKLKENA-----DSDKFRDQGFTRPKVLILLPLASIVYRVVKRLIQLTP 294

Query: 294 PPSKHKEVDVENRGRFSDEYGM-----GTNKLDGTENSKSVKSSQPSDFHKLFDGNNNDN 130
              K   V+VE+  RFS ++G       T   D +EN+K  KSS+ +DF  LF GNN D+
Sbjct: 295 SAFK---VNVEHMDRFSTKFGSEEHKGNTENDDESENAKPQKSSKATDFQILFGGNNEDD 351

Query: 129 FMIGIKISRNSIKLYNDFHASEMIVASPLGLITKIGEAEKDKE 1
           FMIGIK +R +IKL++DFH S++I+AS L L+ KI EA  +KE
Sbjct: 352 FMIGIKFTRKTIKLFSDFHTSDIIIASALCLVNKIEEAGSNKE 394


>ref|NP_564032.1| uncharacterized protein [Arabidopsis thaliana]
           gi|23297505|gb|AAN12983.1| unknown protein [Arabidopsis
           thaliana] gi|332191501|gb|AEE29622.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 754

 Score =  144 bits (364), Expect(2) = 7e-63
 Identities = 78/164 (47%), Positives = 101/164 (61%)
 Frame = -2

Query: 964 DTEDAGNYGDEVSHLDDQYDINVKGRCAALTSVSKSSFDEHFCYKLSKEEITDLTKGKRK 785
           + ED  +Y  +    ++ ++++  G+     S S S+F EH  +KLS EE+  L KGK K
Sbjct: 148 EEEDPDDYETD----EEVHELSTNGQSFVDASSSISAFSEHLSHKLSSEEVETLPKGKWK 203

Query: 784 NKCKENWEMAADNMSRCKWIGTGECFLEKKDIYKHYGLKRKLYKHWSDIYNMESGGRDFN 605
            K    WE  A +M  CKW GT E FL+       YGLK KLY HW  +Y  + GG+D +
Sbjct: 204 FK----WESPAFDMPNCKWKGTSENFLDGIQSDAPYGLKPKLYNHWLQLYK-KCGGKDLD 258

Query: 604 SSKQRSFFFLCNSYRDILYHNKKPFYLKGSKEDSSIMDAYIMHS 473
           SSK+R FF +CNSY DIL+ NKKPFY  GS EDSS MDAY+MHS
Sbjct: 259 SSKRRKFFSICNSYLDILHSNKKPFYHCGSDEDSSAMDAYLMHS 302



 Score =  123 bits (309), Expect(2) = 7e-63
 Identities = 76/167 (45%), Positives = 107/167 (64%), Gaps = 9/167 (5%)
 Frame = -3

Query: 474 RHLVTKNDAEVAKLQANTKDLMLNSADFLDCGFTCPKXXXXXXXXXXXXLVVERLIQLTP 295
           R LV KN++++AK +  +++ +L+   FLD GFT PK             VV+RLIQLTP
Sbjct: 310 RDLVKKNESKIAKHRETSEEEILSDDGFLDQGFTRPKVLILLPLRSIAFRVVKRLIQLTP 369

Query: 294 PPSKHKEVDVENRGRFSDEYGM--GTNKLDGTE------NSKSVKSSQPSDFHKLFDGNN 139
              + + V+VE+  RF+DE+G    T+  DG +      NS   KSS+PSD+  LF  NN
Sbjct: 370 ---ESQRVNVEHLDRFNDEFGCEEDTDDCDGEKTTSKNGNSIKQKSSKPSDWQALFGANN 426

Query: 138 NDN-FMIGIKISRNSIKLYNDFHASEMIVASPLGLITKIGEAEKDKE 1
           ND+ FM+GIK +R SI+LY DF++S++IVASPL L   IG AE++KE
Sbjct: 427 NDDEFMLGIKHTRKSIRLYGDFYSSDIIVASPLKLHMAIGAAEENKE 473


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