BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033802
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55402.1| PH01B015M02.3 [Phyllostachys edulis]                  194   1e-47
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   186   2e-45
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   186   2e-45
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   175   5e-42
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   175   6e-42

>emb|CCI55402.1| PH01B015M02.3 [Phyllostachys edulis]
          Length = 478

 Score =  194 bits (492), Expect = 1e-47
 Identities = 96/205 (46%), Positives = 141/205 (68%), Gaps = 5/205 (2%)
 Frame = -1

Query: 603 SNLRCYNCSAFGHFAADCKKPRRNRESKEEVYMAKL---EDDEPALLLAKYEREDPKNTH 433
           S+++C+NC  +GH+A++C    RN++  EEV + +    EDD+P LLL+    + P    
Sbjct: 231 SHIKCFNCDKYGHYASNC----RNKKKNEEVNLIRSCENEDDDPTLLLSLCVNKAPVMVM 286

Query: 432 LNENKVIPSKLSKV--QDESNVWYLDNGASSHMTGFKSKFMNLDEQIRGLVSFGDGSTVR 259
           LNE  V+P   ++    D ++ WYLD+ AS+HMTG +S F  LDE+I G + FG+ STV+
Sbjct: 287 LNEENVLPKLRTEGGNHDHTDEWYLDSRASNHMTGDRSMFHELDEKISGEIKFGNCSTVQ 346

Query: 258 IEGKGTVVFECKNGETRTLEDVYYIPTLRNNIISLGQMTEQGNRITIKGEMLWVYDEGDK 79
           I+GKGT++  CKNG+ + L D+Y+IP+L NNI+SLGQ+ E+G R+ ++GE L VYD+   
Sbjct: 347 IKGKGTMLLRCKNGDQKMLPDIYFIPSLCNNILSLGQLAERGCRVELQGEFLRVYDKNKD 406

Query: 78  LLMKVKRSPNRLYKIVINSAKQRCM 4
           LLM VKRSPNRLYKI + + K  C+
Sbjct: 407 LLMNVKRSPNRLYKISLETCKSVCV 431


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/204 (44%), Positives = 140/204 (68%), Gaps = 3/204 (1%)
 Frame = -1

Query: 603 SNLRCYNCSAFGHFAADCKKPRRNRESKEEVYMAKLEDDEPALLLAKYEREDPKNTHLNE 424
           S+++CYNC  FGH++  C  P++    K E ++A+ +D  PALLLA  E E      ++E
Sbjct: 285 SHIKCYNCEEFGHYSTQCPHPKKK---KVEAHLAQTDDANPALLLAVTEDEPASGLVVHE 341

Query: 423 NKVIPSKLSKVQDES--NVWYLDNGASSHMTGFKSKFMNLDEQIRGLVSFGDGSTVRIEG 250
            +V P  L      +  ++W+LDNGAS+HMTG ++KF +LD  I G V FGD STV+I+G
Sbjct: 342 ERVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQG 401

Query: 249 KGTVVFECKNGETRTLEDVYYIPTLRNNIISLGQMTEQGNRITIKGEMLWVYDEGD-KLL 73
           KG+++F CKNG+   L+DV+YIP+L  N++SLGQ+TE G+R+ +  ++L V+D+   +L+
Sbjct: 402 KGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLV 461

Query: 72  MKVKRSPNRLYKIVINSAKQRCML 1
           M+V+R+PNRLY+I +  A   C+L
Sbjct: 462 MRVRRTPNRLYRIELKLATPVCLL 485


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/204 (44%), Positives = 140/204 (68%), Gaps = 3/204 (1%)
 Frame = -1

Query: 603 SNLRCYNCSAFGHFAADCKKPRRNRESKEEVYMAKLEDDEPALLLAKYEREDPKNTHLNE 424
           S+++CYNC  FGH++  C  P++    K E ++A+ +D  PALLLA  E E      ++E
Sbjct: 285 SHIKCYNCEEFGHYSTQCPHPKKK---KVEAHLAQTDDANPALLLAVTEDEPASGLVVHE 341

Query: 423 NKVIPSKLSKVQDES--NVWYLDNGASSHMTGFKSKFMNLDEQIRGLVSFGDGSTVRIEG 250
            +V P  L      +  ++W+LDNGAS+HMTG ++KF +LD  I G V FGD STV+I+G
Sbjct: 342 ERVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQG 401

Query: 249 KGTVVFECKNGETRTLEDVYYIPTLRNNIISLGQMTEQGNRITIKGEMLWVYDEGD-KLL 73
           KG+++F CKNG+   L+DV+YIP+L  N++SLGQ+TE G+R+ +  ++L V+D+   +L+
Sbjct: 402 KGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLV 461

Query: 72  MKVKRSPNRLYKIVINSAKQRCML 1
           M+V+R+PNRLY+I +  A   C+L
Sbjct: 462 MRVRRTPNRLYRIELKLATPVCLL 485


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  175 bits (444), Expect = 5e-42
 Identities = 93/211 (44%), Positives = 137/211 (64%), Gaps = 10/211 (4%)
 Frame = -1

Query: 603 SNLRCYNCSAFGHFAADCKKPRRNRESKEEVYMAKLEDDEPALLLAKYE------REDPK 442
           S+++C+NC  FGH++  C  P++    K E ++A+ ED  P LLLA  E      R+D  
Sbjct: 231 SHIKCFNCEEFGHYSTQCPHPKKK---KAEAHLAQTEDAGPTLLLAVTEAVQNASRQDAL 287

Query: 441 -NTHLNENKVIPSKL--SKVQDESNVWYLDNGASSHMTGFKSKFMNLDEQIRGLVSFGDG 271
               ++E +V P  +   K     ++WYLDNGAS+HM+G   KF  LDE + G V FGD 
Sbjct: 288 CGLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDA 347

Query: 270 STVRIEGKGTVVFECKNGETRTLEDVYYIPTLRNNIISLGQMTEQGNRITIKGEMLWVYD 91
           S+V+I GKG+++F CKNG+   L+DVYYIP+L  N++SLGQ+TE G+R+ + G+ L V+D
Sbjct: 348 SSVQIMGKGSILFSCKNGDQWLLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFD 407

Query: 90  EGD-KLLMKVKRSPNRLYKIVINSAKQRCML 1
           +   +L+MKV+RS NRLY+I +  A   C+L
Sbjct: 408 KNPWRLVMKVRRSSNRLYRIELQLASPVCLL 438


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  175 bits (443), Expect = 6e-42
 Identities = 92/201 (45%), Positives = 127/201 (63%)
 Frame = -1

Query: 603 SNLRCYNCSAFGHFAADCKKPRRNRESKEEVYMAKLEDDEPALLLAKYEREDPKNTHLNE 424
           S + C++C   GHFA+ C  P +N +   ++  A+ E  E AL + +          LNE
Sbjct: 135 SQIECFHCHKKGHFASVC--PEKNDD--HQLNKAETEVAEAALYMHEV-------VFLNE 183

Query: 423 NKVIPSKLSKVQDESNVWYLDNGASSHMTGFKSKFMNLDEQIRGLVSFGDGSTVRIEGKG 244
             V+P KL + + +   WYLDNGAS+HMTG KS F  L+E I+G V FGDGS V+I GKG
Sbjct: 184 ESVMPKKLEQNKTDDGNWYLDNGASNHMTGDKSFFSELNESIKGRVKFGDGSCVKINGKG 243

Query: 243 TVVFECKNGETRTLEDVYYIPTLRNNIISLGQMTEQGNRITIKGEMLWVYDEGDKLLMKV 64
           +++FE K GE + L ++YYIP LR+NI+SLGQ TEQG  + +K   L + D   +LL+KV
Sbjct: 244 SIIFEAKTGEQKLLTNIYYIPELRSNILSLGQATEQGCDVRMKDNYLTLRDPSGRLLVKV 303

Query: 63  KRSPNRLYKIVINSAKQRCML 1
            RSPNRLYK+ +   K  C+L
Sbjct: 304 LRSPNRLYKVSLKVGKPSCLL 324