BLASTX nr result

ID: Bupleurum21_contig00033771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033771
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006607888.1| movement protein [Soybean Putnam virus] gi|4...    75   4e-12
ref|NP_659393.1| hypothetical protein [Mirabilis mosaic virus] g...    69   5e-10
ref|NP_619544.1| Movement protein [Figwort mosaic virus] gi|1400...    69   5e-10
ref|NP_612573.1| Movement protein [Carnation etched ring virus] ...    66   3e-09
emb|CAH59634.1| Movement protein [Carnation etched ring virus] g...    65   6e-09

>ref|YP_006607888.1| movement protein [Soybean Putnam virus] gi|401620156|gb|AFP95346.1|
           movement protein [Soybean Putnam virus]
          Length = 315

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = -1

Query: 404 KKNEYIELDDIFSEIGSVEEKQFSEISPLDNSWAIDIAKNKPFLKQQPRKSLSQRDNTRK 225
           K  EYIE+D +FS+IG VEEKQFS+ISP++++WA+DIA+NK  L Q P +S+        
Sbjct: 226 KHKEYIEIDQVFSDIGHVEEKQFSDISPIEDTWALDIAQNKGRLGQGPIRSI-------- 277

Query: 224 SFRKNTLEIGEPSNQE--LLHSVSRRVDGLCRKLDHL*E 114
             R NT+ IG  S  +   L  +S+++D   + L  L E
Sbjct: 278 --RGNTMHIGSTSRPKDISLVDISKQIDEFGKTLKTLSE 314


>ref|NP_659393.1| hypothetical protein [Mirabilis mosaic virus]
           gi|21427192|gb|AAM53124.1| ORFI [Mirabilis mosaic virus]
          Length = 323

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
 Frame = -1

Query: 404 KKNEYIELDDIFSEIGSVEEKQFSEISPLDNSWAIDIAKNKPFLKQQPRKSLSQRDNTRK 225
           K N  IE+D++FSE+G+V+E+ F EI   D +W+I+I +NK  +  +PR+++        
Sbjct: 232 KNNSDIEIDEVFSELGNVQERSFCEIPSYDENWSINIDRNKTRINSKPRETV-------- 283

Query: 224 SFRKNTLEIGEPSNQ---ELLHSVSRRVDGLCRKLDHL 120
             R NTL  GE ++Q   +LL  +S+ +D L  KL+ +
Sbjct: 284 --RGNTLTFGEGTSQNQNQLLRQMSKNIDCLREKLEQI 319


>ref|NP_619544.1| Movement protein [Figwort mosaic virus]
           gi|140003|sp|P09520.1|MOVP_FMVD RecName: Full=Movement
           protein; Short=Mov; AltName: Full=Cell-to-cell transport
           protein gi|58809|emb|CAA29523.1| unnamed protein product
           [Figwort mosaic virus]
          Length = 323

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/92 (36%), Positives = 60/92 (65%)
 Frame = -1

Query: 404 KKNEYIELDDIFSEIGSVEEKQFSEISPLDNSWAIDIAKNKPFLKQQPRKSLSQRDNTRK 225
           +KN  IE++++F +IG +EE  F +ISP+D +W +DIA+NK        KS++   ++R+
Sbjct: 234 RKNSNIEIEEVFKDIGQIEESPFCDISPIDENWTMDIARNK--------KSIATGSSSRR 285

Query: 224 SFRKNTLEIGEPSNQELLHSVSRRVDGLCRKL 129
           +FR +   + E  ++ LL S+S ++D L +KL
Sbjct: 286 NFRIDE-SLLENKDENLLRSMSTKIDTLGKKL 316


>ref|NP_612573.1| Movement protein [Carnation etched ring virus]
           gi|140002|sp|P05396.1|MOVP_CERV RecName: Full=Movement
           protein; Short=Mov; AltName: Full=Cell-to-cell transport
           protein gi|58859|emb|CAA28356.1| unnamed protein product
           [Carnation etched ring virus] gi|225352|prf||1301227A
           ORF 1
          Length = 319

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/95 (40%), Positives = 59/95 (62%)
 Frame = -1

Query: 404 KKNEYIELDDIFSEIGSVEEKQFSEISPLDNSWAIDIAKNKPFLKQQPRKSLSQRDNTRK 225
           K+ + IE+DD+FSEIGSV+   F+E+ P  NSWAIDIA+ K  +  +P+ ++S   N   
Sbjct: 229 KEKDAIEIDDVFSEIGSVKSPTFTELDPEPNSWAIDIAQGKQPIGFKPKPTVS---NNFL 285

Query: 224 SFRKNTLEIGEPSNQELLHSVSRRVDGLCRKLDHL 120
            F K T      S+Q+ L  +S ++D L  KL+++
Sbjct: 286 RFDKETSP--SSSHQKSLEEISDKIDTLVVKLNNI 318


>emb|CAH59634.1| Movement protein [Carnation etched ring virus]
           gi|55250905|emb|CAH68825.1| movement protein [Carnation
           etched ring virus]
          Length = 319

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/95 (40%), Positives = 58/95 (61%)
 Frame = -1

Query: 404 KKNEYIELDDIFSEIGSVEEKQFSEISPLDNSWAIDIAKNKPFLKQQPRKSLSQRDNTRK 225
           K+ + IE+DD+FSEIGSV+   F+E+ P  NSWAIDIA+ K  +  +P+  +S   N   
Sbjct: 229 KEKDAIEIDDVFSEIGSVKSPTFTELDPEPNSWAIDIAQGKQPIGFKPKPIVS---NNFL 285

Query: 224 SFRKNTLEIGEPSNQELLHSVSRRVDGLCRKLDHL 120
            F K T      S+Q+ L  +S ++D L  KL+++
Sbjct: 286 RFDKETSP--SSSHQKSLEEISDKIDTLVVKLNNI 318


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