BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033757
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             211   7e-53
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   207   7e-52
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             206   2e-51
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   205   3e-51
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   205   4e-51

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  211 bits (536), Expect = 7e-53
 Identities = 98/132 (74%), Positives = 116/132 (87%)
 Frame = -1

Query: 396 KDPFPLPHIDSLVDATAGHELLSFMDAYSGYNQILMHPEDQEKTSFVTERGIYCFKVMNF 217
           KD FPLPHID LV++TAG+ELL+FMDA+SG NQI+M+PEDQEKTSF+T+RGIYC+KVM F
Sbjct: 87  KDSFPLPHIDRLVESTAGNELLTFMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPF 146

Query: 216 GLKNAGSTYQRLVNKMFKRMLGKTMEVYIDDMLVKSLQAQDHLDHLRQTFEVLRKFNMKL 37
           GLKNAG+TYQRLVNKMF   LGKTMEVYIDDMLVKSL+ +DH+ HL + F +L K+ MKL
Sbjct: 147 GLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKL 206

Query: 36  NPTKCSFGVSSG 1
           NP KC+FGV SG
Sbjct: 207 NPAKCTFGVPSG 218


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  207 bits (527), Expect = 7e-52
 Identities = 94/132 (71%), Positives = 115/132 (87%)
 Frame = -1

Query: 396 KDPFPLPHIDSLVDATAGHELLSFMDAYSGYNQILMHPEDQEKTSFVTERGIYCFKVMNF 217
           KD FPLPHID LV++TAG+ELLSFMDA+SGYNQI+M+PEDQEKT F+T+RGIYC+KVM F
Sbjct: 530 KDSFPLPHIDRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPF 589

Query: 216 GLKNAGSTYQRLVNKMFKRMLGKTMEVYIDDMLVKSLQAQDHLDHLRQTFEVLRKFNMKL 37
           GL+NAG+TY RLVNKMF   +GKTMEVYIDDML+KSL+ +DH+ HL + F +L ++ MKL
Sbjct: 590 GLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKL 649

Query: 36  NPTKCSFGVSSG 1
           NP KC+FGV SG
Sbjct: 650 NPAKCTFGVPSG 661


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  206 bits (523), Expect = 2e-51
 Identities = 94/132 (71%), Positives = 116/132 (87%)
 Frame = -1

Query: 396  KDPFPLPHIDSLVDATAGHELLSFMDAYSGYNQILMHPEDQEKTSFVTERGIYCFKVMNF 217
            KD +PLPHID LV+AT+G+ LLSFMDA+SGYNQILMH +DQEKTSFVT+RG YC+KVM+F
Sbjct: 890  KDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSF 949

Query: 216  GLKNAGSTYQRLVNKMFKRMLGKTMEVYIDDMLVKSLQAQDHLDHLRQTFEVLRKFNMKL 37
            GLKNAG+TYQR VNKM    +G+T+EVYIDDMLVKSL+ +DH++HL + F+VL  + MKL
Sbjct: 950  GLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKL 1009

Query: 36   NPTKCSFGVSSG 1
            NPTKC+FGV+SG
Sbjct: 1010 NPTKCTFGVTSG 1021


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/132 (71%), Positives = 116/132 (87%)
 Frame = -1

Query: 396  KDPFPLPHIDSLVDATAGHELLSFMDAYSGYNQILMHPEDQEKTSFVTERGIYCFKVMNF 217
            KD FPLPHID LV+ATAG+ELLSFMDA+SGYNQILMH  D+EKT F+T++G YC+KVM F
Sbjct: 848  KDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVFITDQGTYCYKVMPF 907

Query: 216  GLKNAGSTYQRLVNKMFKRMLGKTMEVYIDDMLVKSLQAQDHLDHLRQTFEVLRKFNMKL 37
            GLKNAG+TY RLVN+MF   L  +MEVYIDDMLVKSL+A++H+ HLRQ F+VL ++NMKL
Sbjct: 908  GLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKL 967

Query: 36   NPTKCSFGVSSG 1
            NP+KC+FGV+SG
Sbjct: 968  NPSKCTFGVTSG 979


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  205 bits (521), Expect = 4e-51
 Identities = 95/132 (71%), Positives = 111/132 (84%)
 Frame = -1

Query: 396 KDPFPLPHIDSLVDATAGHELLSFMDAYSGYNQILMHPEDQEKTSFVTERGIYCFKVMNF 217
           KD FPLPHID +V+AT G+ELLSFMDA+SGYNQI MH +DQEKTSF+ +RG YC+KVM F
Sbjct: 563 KDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQIPMHKDDQEKTSFIIDRGTYCYKVMPF 622

Query: 216 GLKNAGSTYQRLVNKMFKRMLGKTMEVYIDDMLVKSLQAQDHLDHLRQTFEVLRKFNMKL 37
           GLKN G+ YQRLVN+MF   LGKTMEVYIDDMLVKS ++ DH+DHL+  FE L K+NMKL
Sbjct: 623 GLKNVGARYQRLVNQMFAPQLGKTMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKL 682

Query: 36  NPTKCSFGVSSG 1
           NP KC FGV+SG
Sbjct: 683 NPAKCLFGVTSG 694