BLASTX nr result

ID: Bupleurum21_contig00033727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033727
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145717.1| PREDICTED: uncharacterized protein LOC101208...   359   5e-97
ref|XP_002300085.1| predicted protein [Populus trichocarpa] gi|2...   333   4e-89
ref|XP_002265120.1| PREDICTED: uncharacterized protein LOC100267...   329   4e-88
ref|XP_002871612.1| predicted protein [Arabidopsis lyrata subsp....   296   4e-78
dbj|BAC42209.1| unknown protein [Arabidopsis thaliana]                294   2e-77

>ref|XP_004145717.1| PREDICTED: uncharacterized protein LOC101208807 [Cucumis sativus]
           gi|449530839|ref|XP_004172399.1| PREDICTED:
           uncharacterized protein LOC101230318 [Cucumis sativus]
          Length = 244

 Score =  359 bits (921), Expect = 5e-97
 Identities = 169/223 (75%), Positives = 197/223 (88%)
 Frame = +2

Query: 161 AHFIVFKNWSSKLRPEAASCLISFAHGTPAVFLAIVAILSDQNRGFASINTPLQALVLDY 340
           A+F++F+NWS K+RPEAASC ISFAHGTPAVFLA  AILSD  RGFAS N+ LQ LVLDY
Sbjct: 22  AYFLLFRNWSPKIRPEAASCAISFAHGTPAVFLASGAILSDAGRGFASPNSDLQNLVLDY 81

Query: 341 SVAYFLMDLTHYLIFYPSDVLFIAHHLATLFVFITCRFLVFHGAYAILMLLIIAEVTSFC 520
           S+AYFLMDL HYLIF+PSD+LFIAHHL TLFVF+TCR+LV HGAYAIL+LLI+AEVTSFC
Sbjct: 82  SIAYFLMDLLHYLIFFPSDLLFIAHHLVTLFVFVTCRYLVSHGAYAILVLLILAEVTSFC 141

Query: 521 QNTWTLACARRGDSQFANKVFDLLSPPFYVFYTVVRGFVGPWFLYEMGKFYANGAAADVI 700
           QN WTLA ARR D +FA++V+++LSPPFYV Y++VRGFVGP+FLY+MG+F+ NG A  VI
Sbjct: 142 QNVWTLARARRADVEFADRVYNILSPPFYVLYSIVRGFVGPYFLYKMGEFFFNGGAETVI 201

Query: 701 PTWVWVSWIMVVLMAILVSILWITNLWLELYRERSIKLQKKGR 829
           PTWVW+SWI VV  AI VSILWITNLW+ELYRERS KL+KKGR
Sbjct: 202 PTWVWMSWIFVVAAAISVSILWITNLWVELYRERSSKLEKKGR 244


>ref|XP_002300085.1| predicted protein [Populus trichocarpa] gi|222847343|gb|EEE84890.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  333 bits (853), Expect = 4e-89
 Identities = 156/245 (63%), Positives = 194/245 (79%)
 Frame = +2

Query: 89  MESISPSIQNLCXXXXXXXXXXXXAHFIVFKNWSSKLRPEAASCLISFAHGTPAVFLAIV 268
           ME++  S+ +L             AHF+VF+NWS K+RPEAASCLIS  HGTPAVFLA  
Sbjct: 1   METLIKSLPDLPILFAFFLTIYLAAHFLVFRNWSPKIRPEAASCLISIFHGTPAVFLATH 60

Query: 269 AILSDQNRGFASINTPLQALVLDYSVAYFLMDLTHYLIFYPSDVLFIAHHLATLFVFITC 448
           A+ ++ NRGF+S+NT  +A VLDYS++YFLMDL HYLIF PSD+LFI HHLATLFVF+TC
Sbjct: 61  ALFTNPNRGFSSLNTKTEASVLDYSISYFLMDLIHYLIFSPSDILFIGHHLATLFVFVTC 120

Query: 449 RFLVFHGAYAILMLLIIAEVTSFCQNTWTLACARRGDSQFANKVFDLLSPPFYVFYTVVR 628
           R+LV  GAYA+LMLLI+AEVTS CQN WTLA ARR D +FA KV+D LS PFY FY+VVR
Sbjct: 121 RYLVARGAYAVLMLLILAEVTSACQNAWTLANARRIDVEFAAKVYDFLSLPFYAFYSVVR 180

Query: 629 GFVGPWFLYEMGKFYANGAAADVIPTWVWVSWIMVVLMAILVSILWITNLWLELYRERSI 808
           G +GP+F+Y+MG F+ +G    +IP W+WVSW+ VV++AI VSILW+TNLW++LYRERS 
Sbjct: 181 GILGPYFVYQMGAFFISGVDGGIIPKWIWVSWLFVVVIAISVSILWVTNLWVQLYRERSA 240

Query: 809 KLQKK 823
           KL+KK
Sbjct: 241 KLEKK 245


>ref|XP_002265120.1| PREDICTED: uncharacterized protein LOC100267906 [Vitis vinifera]
           gi|296090259|emb|CBI40078.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  329 bits (844), Expect = 4e-88
 Identities = 153/219 (69%), Positives = 183/219 (83%)
 Frame = +2

Query: 164 HFIVFKNWSSKLRPEAASCLISFAHGTPAVFLAIVAILSDQNRGFASINTPLQALVLDYS 343
           +F+VF+NWS K+RPEA+SC IS AHGTPAV LA  A+ +D  RGFA+ NT  Q LVLDYS
Sbjct: 28  YFVVFRNWSPKIRPEASSCFISLAHGTPAVVLASFALYADSQRGFAAPNTAFQGLVLDYS 87

Query: 344 VAYFLMDLTHYLIFYPSDVLFIAHHLATLFVFITCRFLVFHGAYAILMLLIIAEVTSFCQ 523
           +AYFLMDL HYL+F+PSD+LFI HHLATLFVF+TCR++VFHG+YAIL+LL++AEVTS  Q
Sbjct: 88  IAYFLMDLCHYLVFFPSDILFIGHHLATLFVFVTCRYVVFHGSYAILVLLVLAEVTSAFQ 147

Query: 524 NTWTLACARRGDSQFANKVFDLLSPPFYVFYTVVRGFVGPWFLYEMGKFYANGAAADVIP 703
           NTWTLA A + D   A KV++LLSPPFY FY+VVRGF+GP F+Y+MG F+ +GAA  VIP
Sbjct: 148 NTWTLAGALKSDVATAAKVYELLSPPFYAFYSVVRGFIGPLFMYKMGVFFLSGAADHVIP 207

Query: 704 TWVWVSWIMVVLMAILVSILWITNLWLELYRERSIKLQK 820
            WVWVSWI VVL AI+VSILWI+NLW ELYRER  KLQK
Sbjct: 208 RWVWVSWIFVVLSAIMVSILWISNLWAELYRERKTKLQK 246


>ref|XP_002871612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317449|gb|EFH47871.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 553

 Score =  296 bits (758), Expect = 4e-78
 Identities = 145/219 (66%), Positives = 170/219 (77%), Gaps = 2/219 (0%)
 Frame = +2

Query: 161 AHFIVFKNWSSKLRPEAASCLISFAHGTPAVFLAIVAILSDQNRGFASINTPLQALVLDY 340
           A+FIVF+NW  ++RPEA+SCLIS  HGTPAVFLA  A+ S   R FAS NT  Q  VLD+
Sbjct: 332 AYFIVFRNWKPQIRPEASSCLISIFHGTPAVFLATRAVFSSSARSFASANTAAQNTVLDF 391

Query: 341 SVAYFLMDLTHYLIFYPSDVLFIAHHLATLFVFITCRFLVFHGAYAILMLLIIAEVTSFC 520
           SVAYFL DL HY++F P+DVLFI HHLATLFVF+TCRFLVFHGA AIL LLI+AEVTS C
Sbjct: 392 SVAYFLTDLFHYIVFNPNDVLFIGHHLATLFVFLTCRFLVFHGACAILGLLILAEVTSAC 451

Query: 521 QNTWTLACARRGD--SQFANKVFDLLSPPFYVFYTVVRGFVGPWFLYEMGKFYANGAAAD 694
           QN WTLA AR+ D  S+ A KV+DLLSPPFY FY++VRG +GP F  +M  FYA G A  
Sbjct: 452 QNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLFFGKMVAFYARGGAHG 511

Query: 695 VIPTWVWVSWIMVVLMAILVSILWITNLWLELYRERSIK 811
           VIP W+W+SW +VV  AI VSILWI NLW+EL+R+R  K
Sbjct: 512 VIPNWLWISWAIVVGTAITVSILWIWNLWIELFRQRKAK 550


>dbj|BAC42209.1| unknown protein [Arabidopsis thaliana]
          Length = 254

 Score =  294 bits (752), Expect = 2e-77
 Identities = 146/228 (64%), Positives = 175/228 (76%), Gaps = 5/228 (2%)
 Frame = +2

Query: 161 AHFIVFKNWSSKLRPEAASCLISFAHGTPAVFLAIVAILSDQNRGFASINTPLQALVLDY 340
           A+FIVF+NW  ++RPEA+SCLIS  HG+PAVFLA  A+ S   R FAS NT  Q  VLD+
Sbjct: 27  AYFIVFRNWKPQIRPEASSCLISIFHGSPAVFLATRAVFSSSERSFASANTAAQNTVLDF 86

Query: 341 SVAYFLMDLTHYLIFYPSDVLFIAHHLATLFVFITCRFLVFHGAYAILMLLIIAEVTSFC 520
           SVAYFL DL HY++F P+DVLFI HH+ATLFVF+TCRFLVFHGA AIL LLI+AEVTS C
Sbjct: 87  SVAYFLTDLFHYIVFNPNDVLFIGHHVATLFVFLTCRFLVFHGACAILGLLILAEVTSAC 146

Query: 521 QNTWTLACARRGD--SQFANKVFDLLSPPFYVFYTVVRGFVGPWFLYEMGKFYANGAAAD 694
           QN WTLA AR+ D  S+ A KV+DLLSPPFY FY++VRG +GP F  +M  FYA G A  
Sbjct: 147 QNAWTLAGARKNDPESRLAVKVYDLLSPPFYAFYSIVRGVLGPLFFGKMVAFYARGGAHG 206

Query: 695 VIPTWVWVSWIMVVLMAILVSILWITNLWLELYRER---SIKLQKKGR 829
           VIP W+W+SW +VV +AI VSILWI NLW+EL+ ER    I++ KK R
Sbjct: 207 VIPNWLWISWAIVVGIAITVSILWIWNLWIELFSERKANKIRVDKKIR 254


Top