BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033726
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   341   5e-92
emb|CBI22748.3| unnamed protein product [Vitis vinifera]              337   1e-90
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   337   1e-90
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   332   2e-89
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   331   5e-89

>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  341 bits (875), Expect = 5e-92
 Identities = 157/202 (77%), Positives = 182/202 (90%)
 Frame = +1

Query: 1   AKLGYKFFTWSSDQENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFN 180
           AKLGYKFF WSS QENY HT N+YHL+MKIFAD EE+KAMWRL+DEM+E G PTTARTFN
Sbjct: 134 AKLGYKFFIWSSQQENYRHTANNYHLIMKIFADCEEFKAMWRLLDEMVENGFPTTARTFN 193

Query: 181 IVICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVE 360
           I+ICTCG AGLARK VERFIK KTF+YRPF+HS+NAIL +LL++++Y+LIEWV+QQMLVE
Sbjct: 194 ILICTCGGAGLARKVVERFIKSKTFNYRPFKHSYNAILLSLLAIREYKLIEWVHQQMLVE 253

Query: 361 GHDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAA 540
           G+ PD LTYN+LM AKY+LGKL  FHRLLDEMGRSGFSPD HT+NILLHVLGKG+KP+AA
Sbjct: 254 GYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNILLHVLGKGNKPIAA 313

Query: 541 LNLLNHMKEVGIEASVLHFTTL 606
           L LLNHMKE+G + S+LHFTTL
Sbjct: 314 LKLLNHMKEIGFDPSILHFTTL 335



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 3/201 (1%)
 Frame = +1

Query: 13  YKFFTWSSDQ---ENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFNI 183
           YK   W   Q   E Y     +Y+++M       +     RL+DEM   G      T+NI
Sbjct: 240 YKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNI 299

Query: 184 VICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVEG 363
           ++   G+      A++    +K   + P    F  ++  L          + + +M+  G
Sbjct: 300 LLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNG 359

Query: 364 HDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAAL 543
             PDV+ Y V++      G+L++   + DEM   G  P+  T+N ++  L    K   A 
Sbjct: 360 FVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEAR 419

Query: 544 NLLNHMKEVGIEASVLHFTTL 606
            +L  M   G + + L + TL
Sbjct: 420 CMLKEMGSRGCKPNFLVYNTL 440


>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  337 bits (863), Expect = 1e-90
 Identities = 153/202 (75%), Positives = 183/202 (90%)
 Frame = +1

Query: 1   AKLGYKFFTWSSDQENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFN 180
           AKLGYKFF WS  QENY HTVN+YHL+MKIFA+S+E+KAMWRLVDEMIE+G P TARTF 
Sbjct: 173 AKLGYKFFMWSGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFPVTARTFQ 232

Query: 181 IVICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVE 360
           I+ICTCG+AGLAR+AVERF+K K F+YRPF+HS+NAIL+ LL +KQY+L+EWVYQQML+E
Sbjct: 233 ILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVYQQMLLE 292

Query: 361 GHDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAA 540
            + PD+LTYN++M  KY+LGKLDQFHRLL+E+G +GFSPD HTFNILLH+LGKG+KPLAA
Sbjct: 293 DYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAA 352

Query: 541 LNLLNHMKEVGIEASVLHFTTL 606
           L+LLNHMKEVG + SVLHFTTL
Sbjct: 353 LDLLNHMKEVGFDPSVLHFTTL 374



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
 Frame = +1

Query: 13  YKFFTWSSDQ---ENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFNI 183
           YK   W   Q   E+YS  + +Y+++M       +     RL++E+   G      TFNI
Sbjct: 279 YKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNI 338

Query: 184 VICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVEG 363
           ++   G+      A++    +K   + P    F  ++  L         ++ + +M+  G
Sbjct: 339 LLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLG 398

Query: 364 HDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAAL 543
             PDV+ Y V++      G+L+    L +EM   G  P+  T+N ++  L   +K   A 
Sbjct: 399 CMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEAR 458

Query: 544 NLLNHMKEVGIEASVLHFTTL 606
           ++L  M+  G   + L + TL
Sbjct: 459 SMLKEMESRGCNPNFLVYNTL 479


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  337 bits (863), Expect = 1e-90
 Identities = 153/202 (75%), Positives = 183/202 (90%)
 Frame = +1

Query: 1   AKLGYKFFTWSSDQENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFN 180
           AKLGYKFF WS  QENY HTVN+YHL+MKIFA+S+E+KAMWRLVDEMIE+G P TARTF 
Sbjct: 169 AKLGYKFFMWSGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFPVTARTFQ 228

Query: 181 IVICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVE 360
           I+ICTCG+AGLAR+AVERF+K K F+YRPF+HS+NAIL+ LL +KQY+L+EWVYQQML+E
Sbjct: 229 ILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVYQQMLLE 288

Query: 361 GHDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAA 540
            + PD+LTYN++M  KY+LGKLDQFHRLL+E+G +GFSPD HTFNILLH+LGKG+KPLAA
Sbjct: 289 DYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAA 348

Query: 541 LNLLNHMKEVGIEASVLHFTTL 606
           L+LLNHMKEVG + SVLHFTTL
Sbjct: 349 LDLLNHMKEVGFDPSVLHFTTL 370



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
 Frame = +1

Query: 13  YKFFTWSSDQ---ENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFNI 183
           YK   W   Q   E+YS  + +Y+++M       +     RL++E+   G      TFNI
Sbjct: 275 YKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNI 334

Query: 184 VICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVEG 363
           ++   G+      A++    +K   + P    F  ++  L         ++ + +M+  G
Sbjct: 335 LLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLG 394

Query: 364 HDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAAL 543
             PDV+ Y V++      G+L+    L +EM   G  P+  T+N ++  L   +K   A 
Sbjct: 395 CMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEAR 454

Query: 544 NLLNHMKEVGIEASVLHFTTL 606
           ++L  M+  G   + L + TL
Sbjct: 455 SMLKEMESRGCNPNFLVYNTL 475


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  332 bits (852), Expect = 2e-89
 Identities = 154/202 (76%), Positives = 181/202 (89%)
 Frame = +1

Query: 1   AKLGYKFFTWSSDQENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFN 180
           AKL YKFF W S QE Y HTVN+YHL+M I+A+ EE+KA+WRLVDEMIEKGLP TARTFN
Sbjct: 136 AKLAYKFFVWCSQQEGYQHTVNAYHLVMSIYAECEEFKALWRLVDEMIEKGLPATARTFN 195

Query: 181 IVICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVE 360
           I+I TCG+AGLA+  VERFIK KTF++RPF+HS+NAIL+ LL + QY+LIEWVYQQML++
Sbjct: 196 ILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQMLLD 255

Query: 361 GHDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAA 540
           G   D+LTYN++M+AKY+LGKLDQFHRLLDEMGR+GFSPD HTFNILLHVLGKGDKPLAA
Sbjct: 256 GFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAA 315

Query: 541 LNLLNHMKEVGIEASVLHFTTL 606
           LNLLNHM+E+GIE +VLHFTTL
Sbjct: 316 LNLLNHMREMGIEPTVLHFTTL 337


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  331 bits (849), Expect = 5e-89
 Identities = 152/202 (75%), Positives = 181/202 (89%)
 Frame = +1

Query: 1   AKLGYKFFTWSSDQENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFN 180
           AKL YKFF W S QE Y HTVN+YHL+M I+A+ EE+KA+WRLVDEM+EKGLP TARTFN
Sbjct: 136 AKLAYKFFVWCSQQEGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMVEKGLPATARTFN 195

Query: 181 IVICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVE 360
           I+I TCG+AGLA+  VERFIK KTF++RPF+HS+NAIL+ LL + QY+LIEWVYQQ+L++
Sbjct: 196 ILIRTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQLLLD 255

Query: 361 GHDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAA 540
           G   D+LTYN++M+AKY+LGKLDQFHRLLDEMGR+GFSPD HTFNILLHVLGKGDKPLAA
Sbjct: 256 GFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAA 315

Query: 541 LNLLNHMKEVGIEASVLHFTTL 606
           LNLLNHM+E+GIE +VLHFTTL
Sbjct: 316 LNLLNHMREMGIEPTVLHFTTL 337



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 3/201 (1%)
 Frame = +1

Query: 13  YKFFTWSSDQ---ENYSHTVNSYHLMMKIFADSEEYKAMWRLVDEMIEKGLPTTARTFNI 183
           YK   W   Q   + +S  + +Y+++M       +     RL+DEM   G      TFNI
Sbjct: 242 YKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNI 301

Query: 184 VICTCGQAGLARKAVERFIKLKTFSYRPFRHSFNAILYTLLSVKQYRLIEWVYQQMLVEG 363
           ++   G+      A+     ++     P    F  ++  L         ++ + +M+  G
Sbjct: 302 LLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNG 361

Query: 364 HDPDVLTYNVLMFAKYKLGKLDQFHRLLDEMGRSGFSPDSHTFNILLHVLGKGDKPLAAL 543
             PDV+ Y V++      G++++  ++   M      P+  T+N ++  L    K   A 
Sbjct: 362 CIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEAC 421

Query: 544 NLLNHMKEVGIEASVLHFTTL 606
           ++L  MK  G   +   + TL
Sbjct: 422 SMLKEMKTKGCSPNSFVYNTL 442