BLASTX nr result

ID: Bupleurum21_contig00033714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033714
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313779.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|NP_001236665.1| uncharacterized protein LOC100500603 precurs...    84   2e-14
ref|XP_003627749.1| hypothetical protein MTR_8g037800 [Medicago ...    81   8e-14
ref|XP_002283641.1| PREDICTED: uncharacterized protein LOC100245...    75   6e-12
emb|CAN82852.1| hypothetical protein VITISV_041720 [Vitis vinifera]    74   9e-12

>ref|XP_002313779.1| predicted protein [Populus trichocarpa] gi|222850187|gb|EEE87734.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
 Frame = -1

Query: 370 LMLLKRVCLLFFVLIISASLLSTSHAGRRLPKYTNILEKECVAAL-----------NNDD 224
           LMLLK++ LLF  L+ISAS LSTS AGRR      + E+  V+A            NN+ 
Sbjct: 3   LMLLKKISLLF--LLISASFLSTSFAGRRSKSVNKLAEEVEVSAATYEEISSKPSHNNEA 60

Query: 223 QNIHKRLLRVNTQDYGKYDPAPTFHKPPFKLIPN 122
             IH+RLL+ NT+DYG Y PAP   +PPFKLIPN
Sbjct: 61  TTIHERLLKANTKDYGNYKPAPALVRPPFKLIPN 94


>ref|NP_001236665.1| uncharacterized protein LOC100500603 precursor [Glycine max]
           gi|255630736|gb|ACU15729.1| unknown [Glycine max]
          Length = 93

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/95 (52%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
 Frame = -1

Query: 379 MGNLMLLKRVCLLFFVLIISASLLSTSHAGR-------RLPKYTNILEKECVAA-LNNDD 224
           MG LMLLK+  LLF  L+IS  LLSTS AGR          K  N +E+      LN ++
Sbjct: 1   MGTLMLLKKFTLLF--LLISGPLLSTSFAGRVRSNSIKNFAKDVNAIEEGTPRKPLNKEE 58

Query: 223 -QNIHKRLLRVNTQDYGKYDPAPTFHKPPFKLIPN 122
            + IH+RLLR NT+DYG+YDP+P+  KPPFKLIPN
Sbjct: 59  VRTIHERLLRANTKDYGRYDPSPSLSKPPFKLIPN 93


>ref|XP_003627749.1| hypothetical protein MTR_8g037800 [Medicago truncatula]
           gi|355521771|gb|AET02225.1| hypothetical protein
           MTR_8g037800 [Medicago truncatula]
           gi|388492214|gb|AFK34173.1| unknown [Medicago
           truncatula]
          Length = 91

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 9/93 (9%)
 Frame = -1

Query: 373 NLMLLKRVCLLFFVLIISASLLSTSHAGRRLPKYTNILEKECVA--------ALNNDD-Q 221
           + M LK+  LLF  L+IS SLL+TS AGR    +  I  ++  A        A+N ++ +
Sbjct: 2   DFMFLKKFTLLF--LLISGSLLTTSFAGRA-SNFIRISNEDVNAVHEVTTKMAMNEEEVR 58

Query: 220 NIHKRLLRVNTQDYGKYDPAPTFHKPPFKLIPN 122
           +IH+RLLR NT+DYG+YDP+PTF KPPFKLIPN
Sbjct: 59  SIHERLLRANTKDYGRYDPSPTFSKPPFKLIPN 91


>ref|XP_002283641.1| PREDICTED: uncharacterized protein LOC100245294 [Vitis vinifera]
           gi|297744426|emb|CBI37688.3| unnamed protein product
           [Vitis vinifera]
          Length = 95

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 48/95 (50%), Positives = 59/95 (62%), Gaps = 12/95 (12%)
 Frame = -1

Query: 370 LMLLKRVCLLFFVLIISASLLSTSHAGRR------LPKYTNILE---KECVAALNNDDQN 218
           LMLLK++ LLF  L+ISAS LSTS AGR         K  ++ +   KE     ++  + 
Sbjct: 3   LMLLKKISLLF--LLISASFLSTSFAGRAGRRSKLASKSIHVADAVFKEISRKPSHQYRR 60

Query: 217 ---IHKRLLRVNTQDYGKYDPAPTFHKPPFKLIPN 122
              IH+RLLR NT+DYG YDPAP   KPPFKLIPN
Sbjct: 61  AEAIHERLLRANTRDYGNYDPAPALGKPPFKLIPN 95


>emb|CAN82852.1| hypothetical protein VITISV_041720 [Vitis vinifera]
          Length = 249

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 14/107 (13%)
 Frame = -1

Query: 400 IKEKYLGMGN--LMLLKRVCLLFFVLIISASLLSTSHAGR-----RLPKYTNILEKECVA 242
           +++ ++ + N  +MLLK + LLF  L+ISAS LSTS AGR     +L   +  +      
Sbjct: 145 LEKIFISLSNMGJMLLKXISLLF--LLISASFLSTSFAGRAGRRSKLASKSIXVADAVFK 202

Query: 241 ALNNDDQN-------IHKRLLRVNTQDYGKYDPAPTFHKPPFKLIPN 122
            ++    +       IH+RLLR NT+DYG YDPAP   KPPFKLIPN
Sbjct: 203 EISRKPSHHYRRAEAIHERLLRANTRDYGNYDPAPALGKPPFKLIPN 249


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