BLASTX nr result

ID: Bupleurum21_contig00033688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033688
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276140.2| PREDICTED: protein FAR-RED IMPAIRED RESPONSE...   136   2e-30
emb|CBI27198.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_004147733.1| PREDICTED: protein FAR-RED ELONGATED HYPOCOT...    74   1e-11
ref|XP_002323176.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002308820.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_002276140.2| PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Vitis vinifera]
          Length = 885

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/120 (57%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3    ENCVSRKGKAPLESEAIS--MHEGWQQLAHSSFREPIDDCSYESQEGIQGTEQLNTRVSS 176
            +N +S+K KA  E E I+  M + WQQ+ HS+ R P  DCSYE+QEG+QG EQLN+R S+
Sbjct: 719  KNSMSKKRKANPEQEIITIGMQDSWQQMGHSNLRAPTLDCSYETQEGMQGMEQLNSRAST 778

Query: 177  LDGFFGTQQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQLISTEPLHDTHLLSQQRLLGL 356
            LDG+FGTQQ++ GM +LNS + T +D + +QQSMQGLGQL S  P+HD H +SQQRL GL
Sbjct: 779  LDGYFGTQQIMQGMGQLNSMAATRDDYY-SQQSMQGLGQLNSIAPMHDAHYVSQQRLHGL 837


>emb|CBI27198.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/117 (58%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
 Frame = +3

Query: 12  VSRKGKAPLESEAIS--MHEGWQQLAHSSFREPIDDCSYESQEGIQGTEQLNTRVSSLDG 185
           +S+K KA  E E I+  M + WQQ+ HS+ R P  DCSYE+QEG+QG EQLN+R S+LDG
Sbjct: 1   MSKKRKANPEQEIITIGMQDSWQQMGHSNLRAPTLDCSYETQEGMQGMEQLNSRASTLDG 60

Query: 186 FFGTQQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQLISTEPLHDTHLLSQQRLLGL 356
           +FGTQQ++ GM +LNS + T +D + +QQSMQGLGQL S  P+HD H +SQQRL GL
Sbjct: 61  YFGTQQIMQGMGQLNSMAATRDDYY-SQQSMQGLGQLNSIAPMHDAHYVSQQRLHGL 116


>ref|XP_004147733.1| PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis
           sativus]
          Length = 846

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/77 (45%), Positives = 54/77 (70%)
 Frame = +3

Query: 126 SQEGIQGTEQLNTRVSSLDGFFGTQQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQLIST 305
           +Q+ +Q  ++L++R  +LDG+FG Q  V GMV+LN  + T ++ +GNQQ++QGLGQL S 
Sbjct: 735 AQDSLQQMDKLSSRAVTLDGYFGAQPSVQGMVQLNLMAPTRDNYYGNQQAIQGLGQLNSI 794

Query: 306 EPLHDTHLLSQQRLLGL 356
            P HD +  +QQ + GL
Sbjct: 795 APSHDGYYAAQQSIHGL 811



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
 Frame = +3

Query: 15   SRKGKAPLESEAISM--HEGWQQLAHSSFREPIDDCSYESQEGIQGTEQLNTRVSSLDGF 188
            ++K K   E + +++   +  QQ+   S R    D  + +Q  +QG  QLN    + D +
Sbjct: 719  TKKRKVNCEPDVMTVGAQDSLQQMDKLSSRAVTLDGYFGAQPSVQGMVQLNLMAPTRDNY 778

Query: 189  FGTQQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQL 296
            +G QQ + G+ +LNS + +H+  +  QQS+ GLGQ+
Sbjct: 779  YGNQQAIQGLGQLNSIAPSHDGYYAAQQSIHGLGQM 814


>ref|XP_002323176.1| predicted protein [Populus trichocarpa] gi|222867806|gb|EEF04937.1|
           predicted protein [Populus trichocarpa]
          Length = 843

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/76 (44%), Positives = 54/76 (71%)
 Frame = +3

Query: 129 QEGIQGTEQLNTRVSSLDGFFGTQQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQLISTE 308
           Q+ +Q  ++L++R  +L+G++GTQQ V GMV+LN  + T ++ + NQQ++QGLGQL S  
Sbjct: 733 QDSLQQMDKLSSRAVALEGYYGTQQGVPGMVQLNLMAPTRDNYYSNQQTIQGLGQLNSIA 792

Query: 309 PLHDTHLLSQQRLLGL 356
           P HD +  +QQ + GL
Sbjct: 793 PSHDGYYGTQQSMNGL 808



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = +3

Query: 18  RKGKAPLESEAISMHEGWQQLAHSSFREPIDDCSYESQEGIQGTEQLNTRVSSLDGFFGT 197
           RK  +  E       +  QQ+   S R    +  Y +Q+G+ G  QLN    + D ++  
Sbjct: 719 RKVNSEQEITTDGPQDSLQQMDKLSSRAVALEGYYGTQQGVPGMVQLNLMAPTRDNYYSN 778

Query: 198 QQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQL 296
           QQ + G+ +LNS + +H+  +G QQSM GLGQ+
Sbjct: 779 QQTIQGLGQLNSIAPSHDGYYGTQQSMNGLGQM 811


>ref|XP_002308820.1| predicted protein [Populus trichocarpa] gi|222854796|gb|EEE92343.1|
           predicted protein [Populus trichocarpa]
          Length = 846

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/76 (44%), Positives = 54/76 (71%)
 Frame = +3

Query: 129 QEGIQGTEQLNTRVSSLDGFFGTQQLVHGMVELNSPSLTHNDNFGNQQSMQGLGQLISTE 308
           Q+ +Q  ++L++R  +L+G++GTQQ V GMV+LN  + T ++ + NQQ++QGLGQL S  
Sbjct: 735 QDSLQQMDKLSSRAVALEGYYGTQQGVPGMVQLNLMAPTRDNYYSNQQTIQGLGQLNSIA 794

Query: 309 PLHDTHLLSQQRLLGL 356
           P HD +  +QQ + GL
Sbjct: 795 PSHDGYYGTQQSMHGL 810



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 51  ISMHEGWQQLAHSSFREPIDDCSYESQEGIQGTEQLNTRVSSLDGFFGTQQLVHGMVELN 230
           +   +  QQ+   S R    +  Y +Q+G+ G  QLN    + D ++  QQ + G+ +LN
Sbjct: 732 VGPQDSLQQMDKLSSRAVALEGYYGTQQGVPGMVQLNLMAPTRDNYYSNQQTIQGLGQLN 791

Query: 231 SPSLTHNDNFGNQQSMQGLGQL 296
           S + +H+  +G QQSM GLGQ+
Sbjct: 792 SIAPSHDGYYGTQQSMHGLGQM 813


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