BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033658
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15896.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_002884709.1| pentatricopeptide repeat-containing protein ...   164   7e-39
ref|NP_187518.1| pentatricopeptide repeat-containing protein [Ar...   162   3e-38
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...   159   2e-37

>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/118 (65%), Positives = 97/118 (82%)
 Frame = -3

Query: 359 VTQIVELVHTQKCKCSEDVALTVIKAYSKNCMVDRALHVFDKMRDIFGCEPGIRSCNSVL 180
           V++IVEL+ TQKCKC EDVALTVIKAY+KN M D+AL +F +M +IFGC+PGIRS NS+L
Sbjct: 62  VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLL 121

Query: 179 NVFVDSNQWSKAELFFKSFEAMGVKANLETFNILIKISCKKKQFDKALGILEWMWSEG 6
           N  ++SN+W +AE FF  FE MG+  NL+T+NILIKISC+KKQFDKA  +L WMW +G
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG 179


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/118 (65%), Positives = 97/118 (82%)
 Frame = -3

Query: 359 VTQIVELVHTQKCKCSEDVALTVIKAYSKNCMVDRALHVFDKMRDIFGCEPGIRSCNSVL 180
           V++IVEL+ TQKCKC EDVALTVIKAY+KN M D+AL +F +M +IFGC+PGIRS NS+L
Sbjct: 62  VSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLL 121

Query: 179 NVFVDSNQWSKAELFFKSFEAMGVKANLETFNILIKISCKKKQFDKALGILEWMWSEG 6
           N  ++SN+W +AE FF  FE MG+  NL+T+NILIKISC+KKQFDKA  +L WMW +G
Sbjct: 122 NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG 179


>ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330549|gb|EFH60968.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score =  164 bits (415), Expect = 7e-39
 Identities = 75/118 (63%), Positives = 92/118 (77%)
 Frame = -3

Query: 359 VTQIVELVHTQKCKCSEDVALTVIKAYSKNCMVDRALHVFDKMRDIFGCEPGIRSCNSVL 180
           V +IVEL+ +Q+CKC EDVAL+VIK Y KN M DRAL VF +MR+IFGCEPGIRS N++L
Sbjct: 62  VGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLL 121

Query: 179 NVFVDSNQWSKAELFFKSFEAMGVKANLETFNILIKISCKKKQFDKALGILEWMWSEG 6
           N FV++ QW K E  F  FE  GV  NL+T+N+LIK+SCKKK+F+KA G L WMW EG
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEG 179


>ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09060 gi|5923671|gb|AAD56322.1|AC009326_9
           hypothetical protein [Arabidopsis thaliana]
           gi|332641194|gb|AEE74715.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/118 (61%), Positives = 93/118 (78%)
 Frame = -3

Query: 359 VTQIVELVHTQKCKCSEDVALTVIKAYSKNCMVDRALHVFDKMRDIFGCEPGIRSCNSVL 180
           V++IVEL+ +Q+CKC EDVAL+VIK Y KN M D+AL VF +MR+IFGCEP IRS N++L
Sbjct: 62  VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121

Query: 179 NVFVDSNQWSKAELFFKSFEAMGVKANLETFNILIKISCKKKQFDKALGILEWMWSEG 6
           N FV++ QW K E  F  FE  GV  NL+T+N+LIK+SCKKK+F+KA G L+WMW EG
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score =  159 bits (402), Expect = 2e-37
 Identities = 71/119 (59%), Positives = 96/119 (80%)
 Frame = -3

Query: 359 VTQIVELVHTQKCKCSEDVALTVIKAYSKNCMVDRALHVFDKMRDIFGCEPGIRSCNSVL 180
           V++IV++V  QKC C EDVALTVIKAY+KN M ++AL  F  M+DIFGC+PG+RS N++L
Sbjct: 64  VSRIVDIVKAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLL 123

Query: 179 NVFVDSNQWSKAELFFKSFEAMGVKANLETFNILIKISCKKKQFDKALGILEWMWSEGL 3
           N FV+ N+W +AE F + FE+M V  NL+T+NILIKISCKK+Q +KA+ +L+WMWS+ L
Sbjct: 124 NAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNL 182