BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033639
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [...   133   3e-29
ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [M...   132   1e-28
gb|ABN05856.1| KH, type 1 [Medicago truncatula]                       132   1e-28
ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g...   126   4e-27
ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatul...   125   7e-27

>ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 663

 Score =  133 bits (335), Expect = 3e-29
 Identities = 77/188 (40%), Positives = 114/188 (60%)
 Frame = -1

Query: 720 AAENCRALKLSIDTLPKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVAT 541
           +AE  R   L    L + V+FR+LCS+   G +IG GG+ V++L+  T A+I I   VA 
Sbjct: 293 SAEVNRVSSLEPKALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAE 352

Query: 540 HMERIVTITAWECSEALFSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSN 361
             +R++TI A E  E+ +SPAQ A  L FSRS+E+  E E  S L  G+T++ +L+V S+
Sbjct: 353 CEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSS 412

Query: 360 QVSFLIDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVT 181
           QV  LI   G+I S+IR ATG  +++     +      ND ++QISG + SV +AL+  T
Sbjct: 413 QVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAT 472

Query: 180 SRLRNLIF 157
            RLR+ +F
Sbjct: 473 GRLRDNLF 480



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
 Frame = -1

Query: 675 PKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVATHMERIVTI---TAWE 505
           P  V FRLLC+    G +IG  GS +K+L++ST A I+I        +R++ +    A  
Sbjct: 42  PGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALS 101

Query: 504 CSEAL-------FSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSNQVSFL 346
           C   L        S AQ A+   F R +E+  E+E G  +G    +S +L+ DS Q   +
Sbjct: 102 CKVLLRNEEVVEVSKAQEALLKVFDRILEVAAEME-GVDVG-DRVMSCRLVADSAQAGSV 159

Query: 345 IDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVTSRLRN 166
           I   G +   I+  TG ++++     +      +D +++I G   SV  AL  V+ RL++
Sbjct: 160 IGKGGKVVERIKKETGCKIRV-LTDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQD 218


>ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
           gi|355482320|gb|AES63523.1| Heterogeneous nuclear
           ribonucleoprotein K [Medicago truncatula]
          Length = 766

 Score =  132 bits (331), Expect = 1e-28
 Identities = 72/188 (38%), Positives = 115/188 (61%)
 Frame = -1

Query: 720 AAENCRALKLSIDTLPKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVAT 541
           +AE  R   L      + +TF+++CS+   G +IG GG+ +++L+  T A++ +   VA 
Sbjct: 313 SAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAE 372

Query: 540 HMERIVTITAWECSEALFSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSN 361
             +R++TITA E  E+ +SPAQ A  L FSRSVE   E    S L TG++++AQL+V SN
Sbjct: 373 CEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSN 432

Query: 360 QVSFLIDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVT 181
           QV  L+   G+I S++R ATG  +++     ++     ND ++QISG + +V +AL+  T
Sbjct: 433 QVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNAT 492

Query: 180 SRLRNLIF 157
            RLR+ +F
Sbjct: 493 GRLRDNLF 500



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
 Frame = -1

Query: 666 VTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVATHMERIVTITAWE------ 505
           V FRLLC+    G +IG  G+ +K+L+ +T A I+I        +R++ +          
Sbjct: 48  VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107

Query: 504 -------CSEAL-FSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSNQVSF 349
                    EA+  S AQ A+   F R +E+  E+E G  LG   T+S +L+ DS Q   
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEME-GIELG-DRTVSCRLVADSAQAGS 165

Query: 348 LIDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVTSRLR 169
           +I   G +   I+  TG ++ +    ++ +     D +++I G   SV  AL  V+  L+
Sbjct: 166 VIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQ 224

Query: 168 N 166
           +
Sbjct: 225 D 225


>gb|ABN05856.1| KH, type 1 [Medicago truncatula]
          Length = 564

 Score =  132 bits (331), Expect = 1e-28
 Identities = 72/188 (38%), Positives = 115/188 (61%)
 Frame = -1

Query: 720 AAENCRALKLSIDTLPKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVAT 541
           +AE  R   L      + +TF+++CS+   G +IG GG+ +++L+  T A++ +   VA 
Sbjct: 111 SAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAE 170

Query: 540 HMERIVTITAWECSEALFSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSN 361
             +R++TITA E  E+ +SPAQ A  L FSRSVE   E    S L TG++++AQL+V SN
Sbjct: 171 CEDRLITITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSN 230

Query: 360 QVSFLIDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVT 181
           QV  L+   G+I S++R ATG  +++     ++     ND ++QISG + +V +AL+  T
Sbjct: 231 QVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNAT 290

Query: 180 SRLRNLIF 157
            RLR+ +F
Sbjct: 291 GRLRDNLF 298


>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 710

 Score =  126 bits (317), Expect = 4e-27
 Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
 Frame = -1

Query: 705  RALKLSIDTLPKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVATHMERI 526
            R   L    L + VTFR+LCS+   G +IG GG+ V++L+  T A+I I   VA   +R+
Sbjct: 306  RVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRL 365

Query: 525  VTITAWECSEALFSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSNQVSFL 346
            +TI A E  E+ +SPAQ A  L FSRS+E+  E    S L  G+ ++ +L+V S+QV  L
Sbjct: 366  ITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCL 425

Query: 345  IDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVTSRLRN 166
            I   G+I S++R ATG  +++     +      ND ++QISG + SV +AL+    RLR+
Sbjct: 426  IGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRD 485

Query: 165  LIFSTIVSDEAKKVQXXXXXXXXXXXXNRENTVSRGSEDP--INHDM---TLIQAMDRLG 1
             +F +   + A                 +++ V  GS+ P   +H +   T  Q +D LG
Sbjct: 486  NLFVS-TQNSAGTRSLSSLRVDTSPYGRQQDVVPLGSQLPPATSHSLSRHTFAQGIDHLG 544



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
 Frame = -1

Query: 675 PKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVATHMERIVTITAWECSE 496
           P  V FRLLC+    G +IG  GS +K+L++ST A I+I        +RI+ + A     
Sbjct: 42  PGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALS 101

Query: 495 ALF----------SPAQIAVTLAFSRSVEI---DNEIEPGSSLGTGTTISAQLLVDSNQV 355
                        S AQ A+   F R +     D  ++ G  +     +S +L+ D+ Q 
Sbjct: 102 GKILLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRV-----MSCRLVADAAQA 156

Query: 354 SFLIDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVTSR 175
             +I   G +   I+  TG ++++     +      +D I++I G   SV  AL  V+ R
Sbjct: 157 GSVIGKGGKVVERIKKETGCKIRV-LTDDLPLCASASDEIIEIEGRVSSVKKALVAVSQR 215

Query: 174 LRN 166
           L++
Sbjct: 216 LQD 218


>ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355509450|gb|AES90592.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 616

 Score =  125 bits (315), Expect = 7e-27
 Identities = 75/188 (39%), Positives = 110/188 (58%)
 Frame = -1

Query: 720 AAENCRALKLSIDTLPKVVTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVAT 541
           + E+ R   L  + L + VTFR+LCS    GA++G GGS VK+L+  T A+I +  PV  
Sbjct: 248 SVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVE 307

Query: 540 HMERIVTITAWECSEALFSPAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSN 361
             +R++TITA E  E+ FSPAQ AV L F RS+E   E          ++++AQL+V SN
Sbjct: 308 CEDRLITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSN 367

Query: 360 QVSFLIDTKGMISSDIRTATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVT 181
           QV  L+   G I S++R AT   ++++    +      ND ++QISG   +V +AL+  T
Sbjct: 368 QVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNAT 427

Query: 180 SRLRNLIF 157
            RLR+ IF
Sbjct: 428 RRLRDHIF 435



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
 Frame = -1

Query: 666 VTFRLLCSHKAAGALIGWGGSKVKSLEKSTEASIKISKPVATHMERIVTITAWECSEALF 487
           V FRLLC     GA IG  GS +KSL++ T A I+I        ER++ +      +   
Sbjct: 20  VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDV 79

Query: 486 S-PAQIAVTLAFSRSVEIDNEIEPGSSLGTGTTISAQLLVDSNQVSFLIDTKGMISSDIR 310
           S   Q A+   F R +++      G+ +G    +S +LLV++ Q   +I   GM+ + IR
Sbjct: 80  SLNPQEALLKVFERILDVAAAESDGNGVG-DRVVSCRLLVNAGQAGGVIGKGGMVVAKIR 138

Query: 309 TATGVEMQLSWGSSITSSDGKNDNILQISGLYESVLNALFLVTSRLRN 166
             TG  +++     + +    +D I++I G+  SV  AL  V  RL++
Sbjct: 139 ADTGCRIRV-LNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQD 185