BLASTX nr result

ID: Bupleurum21_contig00033631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033631
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_002328401.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...    64   1e-08
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...    64   1e-08
ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/55 (63%), Positives = 42/55 (76%)
 Frame = -2

Query: 270 SPAAGLIGGNEDLMGQILLHLPVRSLVRFKSVSKLWHSLISDPQFCRTHTLKNPS 106
           S +A +IG NEDL+ QILL LPV+ L+RFKSVSK W SLIS P F   HTL+NP+
Sbjct: 4   SLSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPN 58


>ref|XP_002328401.1| predicted protein [Populus trichocarpa] gi|222838116|gb|EEE76481.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = -2

Query: 303 MANQSKLSGVC---SPAAGLIGGNEDLMGQILLHLPVRSLVRFKSVSKLWHSLISDPQFC 133
           M    KL   C   S +A +IG N DL+ +ILL +P + L++FK VSK W SLISDP+FC
Sbjct: 69  MMRDGKLKQSCYVPSSSAEVIGNNLDLVTEILLRVPAKPLLKFKCVSKQWLSLISDPKFC 128

Query: 132 RTHTLKNPSFLLPCGLYFYNFLPTT 58
            +HT   P    P  L+  ++L ++
Sbjct: 129 ASHTHHQPP-TAPSALFLLSYLASS 152


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/73 (49%), Positives = 46/73 (63%)
 Frame = -2

Query: 270 SPAAGLIGGNEDLMGQILLHLPVRSLVRFKSVSKLWHSLISDPQFCRTHTLKNPSFLLPC 91
           SPA   +  N+DL  QILL LP+RSL+RFKSVSK W SLIS+P F    T+ +     P 
Sbjct: 10  SPATEQVLINDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPS 69

Query: 90  GLYFYNFLPTTKT 52
           G++F    PT K+
Sbjct: 70  GIFFPR--PTPKS 80


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/73 (49%), Positives = 46/73 (63%)
 Frame = -2

Query: 270 SPAAGLIGGNEDLMGQILLHLPVRSLVRFKSVSKLWHSLISDPQFCRTHTLKNPSFLLPC 91
           SPA   +  N+DL  QILL LP+RSL+RFKSVSK W SLIS+P F    T+ +     P 
Sbjct: 10  SPATEQVLINDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPS 69

Query: 90  GLYFYNFLPTTKT 52
           G++F    PT K+
Sbjct: 70  GIFFPR--PTPKS 80


>ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|222858113|gb|EEE95660.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
 Frame = -2

Query: 264 AAGLIGGNEDLMGQILLHLPVRSLVRFKSVSKLWHSLISDPQFCRTHT----LKNPSFLL 97
           +A +I  N+DL+ +IL+ +P + L++FKSVSK W SLISDP+FC  H     + NP+   
Sbjct: 8   SAEIIASNQDLLTEILIRIPAKPLLKFKSVSKQWLSLISDPKFCIWHACHQRVLNPT--- 64

Query: 96  PCGLYFYNFLPTTKTIHTI 40
           P  L   NF  +T T   I
Sbjct: 65  PNALLLNNFYSSTPTFQFI 83


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