BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033615
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   104   9e-21
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...    91   8e-17
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    82   4e-14
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...    82   4e-14
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...    82   5e-14

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2    ETEEAGDIDDQEEMEDEYNNRNYRQTDDAINDDRDEVGENPKDLLAAAGLEDSDAE--VE 175
            E   A  +DDQ+EMEDE  N N+R++ + +N+  D+  ++ +DLLAAAGLEDSDAE  + 
Sbjct: 971  EEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLAAAGLEDSDAEDDMA 1030

Query: 176  NRSATNRSRRAWSESEDDEPVQRQPESSPLRENSVEMQ 289
              S+ NR +RAWSES++DEP  ++PESSP+RENS E+Q
Sbjct: 1031 GPSSGNRRKRAWSESDEDEPQDQRPESSPVRENSAEVQ 1068


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 49/96 (51%), Positives = 67/96 (69%)
 Frame = +2

Query: 2    ETEEAGDIDDQEEMEDEYNNRNYRQTDDAINDDRDEVGENPKDLLAAAGLEDSDAEVENR 181
            E  EA  +DD+EE+EDE  N NY +  + +++  ++  EN +DLLAAAGLEDSDAE    
Sbjct: 947  EEGEADMMDDREELEDEDANVNYGEHKNRLDNQDEDAEENAQDLLAAAGLEDSDAEDAAP 1006

Query: 182  SATNRSRRAWSESEDDEPVQRQPESSPLRENSVEMQ 289
            S+T R RRA SES+DDE +  + +SSP+R NS E+Q
Sbjct: 1007 SSTARRRRALSESDDDEVLDSKLQSSPVRGNSAELQ 1042


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = +2

Query: 2    ETEEA-GDIDDQEEMEDEYNNRNYRQTDDAINDDRDEVGENPKDLLAAAGLEDSDAEVEN 178
            ETEEA  D+ D +E+ +E NN +YR++   +ND  D+   N +D LA AGLEDSDAE E 
Sbjct: 944  ETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEAGLEDSDAEDEA 1003

Query: 179  RSATN---RSRRAWSESEDDEPVQRQPESSPLRENSVEMQ 289
             + ++   R R  WS+SE+DEP+  Q ES   RENS  ++
Sbjct: 1004 GAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLE 1043


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = +2

Query: 2    ETEEA-GDIDDQEEMEDEYNNRNYRQTDDAINDDRDEVGENPKDLLAAAGLEDSDAEVEN 178
            ETEEA  D+ D +E+ +E NN +YR++   +ND  D+   N +D LA AGLEDSDAE E 
Sbjct: 968  ETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEAGLEDSDAEDEA 1027

Query: 179  RSATN---RSRRAWSESEDDEPVQRQPESSPLRENSVEMQ 289
             + ++   R R  WS+SE+DEP+  Q ES   RENS  ++
Sbjct: 1028 GAPSSNAARRRATWSDSEEDEPIDTQRESRLQRENSAGLE 1067


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2    ETEEAGDIDDQEEMEDEYNNRNYRQTDDAINDDRDEVGENPKDLLAAAGLEDSDAEVENR 181
            E EEA  +DD +E ED+  N N+R+    +ND  D   EN +D+LAAAGLEDSDA+ +  
Sbjct: 969  EMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDNAEENAQDVLAAAGLEDSDADDDAA 1028

Query: 182  --SATNRSRRAWSESEDDEPVQRQPESS 259
              S+  R +RAWSES++DE  +R+P+SS
Sbjct: 1029 APSSAGRRKRAWSESDEDEISERKPQSS 1056